Capsicum annuum (peppers): 107842210
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Entry
107842210 CDS
T04646
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107842210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cann03400
]
107842210
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
107842210
FA (Fanconi anemia) pathway
107842210
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Hanta_Gc_C
Motif
Other DBs
NCBI-GeneID:
107842210
NCBI-ProteinID:
XP_016541444
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Position
9:complement(201883719..201896166)
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AA seq
660 aa
AA seq
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MSRRRHQIICSSSSDDEDNDENYDPHQLSAAAAAATATATATATGNEENQQPNNNSNNIE
MEILESSNNFQSVTLNSPNQVPTTPVSEPIGNVAVAAADCGIGRVLEGLGLRLRREWLDS
CVRGLEGRGRFSGLDDTEKAKMSFEQFLYSDMNYCGAGMLPRDVHKLHLVDLKGPFVLQV
DEIVNISCPLRDRYQKAAAGIKRCLKLSMTDGIQRVFGMEYRPIKDLDVLAPSGLKVAIC
NVHIRHGLMMLVPEVIEVLGGMVEELEEARQRLVNEINKPPRGKRTRSGVVPPLANRATN
AAWPREGVTAPEHADTSSRQSMHFQVPQQGMSGVATSATEEIHPITPGLPSAPTITTPVY
RRDAQSNFPSTPAVSVPFNMNVTRPTFPSHAASHAEDIHMADMTTECIDVPIRREHNDPV
RLSSSSMELEELLPDVRSGPATPASSRSRGSVPVSSGSVHNEDVEPDSLSTAATDVEEID
LVDELDHPFILSGGKENPFTYLASLSAKQAGMNGSASAVTGKIKCFLTGVKGFQYRQTSK
YELRVYVDDGSLISEILIDHSLVQKKISFSPEEVTAAISSSDSKRVSDMKETLKCFQKFL
INFEGTMLVHLNVGSPVPVATEMNQGCPASDARLLLKRLKPSTSPRAHHLHQPETIYLSP
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaagacgccaccaaatcatctgttcttcttcctccgacgacgaagacaatgac
gagaactacgatcctcatcaactctctgccgccgccgccgccgccaccgccaccgccacc
gccaccgccactggcaacgaagaaaaccaacaacctaataacaacagcaacaacatcgaa
atggaaattctagaatcttctaacaacttccaatccgtaaccctaaattctccgaaccaa
gtccctactacacctgtcagtgaacctattgggaatgtggcggtggcagcagcggattgt
ggtattggtagggtattggaaggattagggttgagattgcggagggaatggttagattcg
tgtgttagaggacttgaaggaagagggaggttttcgggattggatgatacggagaaggcg
aagatgtcttttgagcagtttttgtattcggatatgaattattgtggtgcaggaatgctt
ccaagagatgttcataagttgcatttggttgatcttaaaggaccctttgttcttcaggta
gatgagattgtgaatatcagttgtcctcttcgagataggtaccagaaagcagctgctgga
ataaagaggtgtctgaaattgtccatgactgatggcattcagcgtgtatttgggatggag
tacaggccaataaaagatctcgacgttctggctccttctggactgaaggttgctatctgt
aatgttcacattaggcatggacttatgatgttggtccctgaagtaattgaagttctgggt
gggatggtggaagagttagaagaagcaagacagcggctagttaatgaaataaataagcca
ccaagggggaaaagaacaaggtctggagtggttcctcctttggcaaatagagctactaat
gctgcatggccacgagaaggtgttacagctccagagcacgccgatacttcctcaagacaa
agtatgcattttcaggttcctcagcaaggaatgtctggcgttgctacttctgcaacagaa
gaaattcatcccattacacctggcttgccatctgctccgacaattaccactcctgtttat
agaagagatgctcaatctaattttccgtctactccagctgtttctgtcccattcaatatg
aacgttactaggcctacctttccatctcatgcagctagtcatgcagaggatatccatatg
gctgacatgaccactgaatgcattgatgttccaattagaagggaacataatgaccctgtc
cgtttgtcttcttcctccatggaactggaggaacttctgccagatgttagaagtggccct
gccacacctgccagtagcaggagcagaggaagtgttcctgtctctagcggtagtgtccat
aatgaagatgtagagccagactcattgtctactgcagcaactgacgttgaagaaattgat
ttggttgatgagttggaccatccattcattctttctggagggaaggaaaaccctttcact
tacctagccagtctgtcggctaagcaggctggtatgaatggtagtgcttccgctgttaca
ggaaaaattaagtgctttcttactggtgtgaagggctttcaatatagacagacgagtaaa
tacgagcttcgggtttatgttgacgatggcagcctaatctctgagatccttatagatcat
tctcttgtgcagaagaaaatcagcttttctcctgaagaggtaactgctgctattagttct
tcagatagtaaacgagtcagtgatatgaaggagacactgaaatgtttccagaaattcttg
attaattttgagggaacaatgcttgtacatttgaatgtaggatccccagttccagttgct
actgaaatgaaccaggggtgtcctgcctctgatgcgcgattgcttctcaaaagactaaag
ccctctacttctccgcgagcacatcaccttcatcaaccagaaaccatctatttatcccct
tga
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