Capsicum annuum (peppers): 107842396
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Entry
107842396 CDS
T04646
Name
(RefSeq) putative rRNA methyltransferase YqxC
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cann03009
]
107842396
Enzymes [BR:
cann01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
107842396
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
107842396
Ribosome biogenesis [BR:
cann03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
107842396
23S rRNA modification factors
107842396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
S4_2
Methyltransf_11
Motif
Other DBs
NCBI-GeneID:
107842396
NCBI-ProteinID:
XP_047252884
LinkDB
All DBs
Position
9:102958330..103010304
Genome browser
AA seq
309 aa
AA seq
DB search
MTLKLPMCRFYSSSLFSCKLPYTTRKLSARWLELKIRNYVSVRTFASVTADKGQPNKKKR
RLDELCLERFQQYSRTFIQSWILQGKVLVDGKVITKAGSQISDKAVVEIMAEIPKYVCRG
GHKLEAAIENLEIDVAGKVALDSGLSTGGFTDCLLQYGTSFVYGVDVGYGQVADKIRRDE
RVSVIERTNLRYLSELPQKVDLVTLDLSFISILLVMPAVVNLMKDEATLVTLIKPQFEAR
RSQVGGGGIVRDPLVHQEVIEKILNGVQNHGFQCKGWIESPLQGAEGNKEFLACFNRAVI
SEKVEKHYA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgaagctaccaatgtgtcgcttctacagctccagccttttctcctgcaaatta
ccatatactactcgaaagctttcagcgagatggttggagttgaaaatccgcaattatgtt
tctgtaagaacttttgcttccgtgactgcagacaagggtcaaccaaacaaaaagaaaaga
agactggatgaattgtgtcttgagagatttcagcaatacagccgtacatttatacagtca
tggatccttcaaggcaaagtgcttgtggatggaaaagtcattaccaaagcagggtctcaa
atctctgataaagctgttgtggagatcatggctgaaattcccaagtacgtatgcagagga
ggacataaactggaggctgcgattgaaaacctggagatcgatgttgcaggaaaagtagct
cttgattcaggcttgtctactggaggatttactgattgtttacttcagtatggtacttca
tttgtctatggagtcgatgtaggatatggacaggtggcagataaaattcgtcgagatgag
cgtgtaagtgttatcgagcgtacaaacttgagatatctttctgaactcccgcaaaaggtt
gacttagtaactttggacctctcttttatttcgatacttctggtgatgcctgcagttgtc
aatttgatgaaggacgaagctactttagtgactctgattaaacctcagtttgaggctcgg
agatcccaagttggaggaggtggaattgtaagggatcccttggtccaccaagaggtgatc
gagaagatcttaaatggggtacaaaaccatggattccaatgcaaaggttggattgaatct
ccgttgcagggagctgaaggtaataaagagtttctagcttgcttcaatcgagcagtcatc
agtgaaaaagtcgagaaacattatgcctag
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