Capsicum annuum (peppers): 107842601
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Entry
107842601 CDS
T04646
Name
(RefSeq) uncharacterized protein LOC107842601 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cann04131
]
107842601
Membrane trafficking [BR:
cann04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107842601
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
107842601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Synaptobrevin
WD40
Beta-prop_RIG_2nd
Lgl_C
WDR55
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_EML
ABC_tran_Xtn
Beta-prop_CAF1B_HIR1
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
107842601
NCBI-ProteinID:
XP_016542027
LinkDB
All DBs
Position
9:complement(68254320..68296045)
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AA seq
1108 aa
AA seq
DB search
MFAKKIFQKATQYHNQHHHPTNDSGLTASDLNVRSTVHYGIPSTASILAVDSIQRLLAVG
TLDGRIKVIGGDNIEGLLISPKQFPYKYLEFLQNQGFLVSITNENDIQVWNLKSRSVACD
LQWESNITAFSVINGSSFMYVGDEHGTISVLKFCVENRELLQLPYQIFWSSLSEAAVFSY
SDHQPVVGILPQPFTSGNRLLIAYESGLIILWDVVEAHVIIVKGDKDLHLKDVAVNFKKN
TDSSSTDDLLQHQLEDKEITTLCWASTDGSILAAGYIDGDILLWKTSKSTASKGQEAGPF
DNVVKLQLSSSEKRLPIIVLHWWANSKSRNNSDGHLLIYGGDETGSDEVITILTLEWSSG
MQTLKCVGRVDLTLSGSFADTVLLPATGATPTDEKAALFVLMSPGQLNLFDCSTLSDLVS
KEEKKVSLSAKDFPVELPTVDPSMTVTKLALLHSDGNLVELLQETPFFKKLSAATSSRAS
RWPLTGGVYNHTSRAETNWIQRVFIAGYPDGSVRMWDATHPVFLLLCVLDREVKGANTII
SSASVSKIDFCFLTLRLAVGDASGLVRLYDFKHSDMGNFHVVTDTKSEVHELAQGQGPTC
RAVLKLLDIRVNAIEFVNHGAKLAVGYENTRVAVLDMTSLSVLFLSDSVSVGSSSLVTLI
AKRFVHSDGNSKSPKQSELPENHMEELMFILTEDAKIYAIDGGNGKSHGSGPLHLKKVST
AISMYVIENNIPFSGIINKQPESIKDDVSTNEHSQEMTTRDLSDTVPFLENDSSRKHFEE
SCILLCCKDSIRTYATKSVVQGDNKSVCKVKLDKPCCWTTTFMKDAKVCALLLLFQSGDI
EIRSLPDLELVEQTSLMSVLRWNFKPNMDRAMSSMENGHITLANGSELAFVSLLASENDF
RIPEYLPSLHDEVLAAAADAAMKFSTQKKKQGGGPNILGTLVKGFKVGKTNHTMDLSLMS
KSNFSHLEGVFMKNPLHQELSPTKEVLEVELDIDDIEIDEPVPVASSSSHNTQNSKRGTE
RQKLLDSEGDDGKPRLRTREEIIAKYRKAGDASSAAGQARDKLLERQEKLERISQRTDEL
RSGAEDFASLANELVKVMENRNKKWWQI
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaagaaaatttttcagaaagccacacaatatcataatcaacatcatcatccg
acaaatgacagtggtttgactgcgagtgacctgaatgttcgttctactgtacattatggt
atcccgtcaacagcatcaattcttgcagtagactccatccagcgcctattggctgttgga
acattggatggtaggataaaagtgattggtggggacaatattgaaggtctcttgatttct
ccaaagcagtttccatacaaatacttagagttccttcaaaaccagggttttcttgtcagc
ataacaaatgaaaatgatattcaggtttggaatctcaaaagcagatctgtagcttgtgat
ttgcaatgggaatcaaatataactgctttttcagttatcaatggctcttccttcatgtat
gttggagatgaacatggaacaatctcagttttgaagttctgtgtagagaacagagagcta
ctgcaactgccatatcagatcttttggagttctctttctgaagcagctgttttttcgtat
tcagatcatcaaccggttgttggaattctcccgcaaccttttacatcgggaaatagatta
ttgattgcttatgagagtggtttaattatactttgggatgttgtcgaagcccatgttatc
attgtcaaaggtgataaagatctccatttgaaggatgttgctgtaaactttaaaaagaac
acagattccagctctactgatgatctattgcagcaccaattagaggacaaagagataacc
acactttgctgggcatccactgatgggtccattcttgctgctgggtacatagatggagat
attctgctttggaaaacatcaaaatcgaccgcaagcaaaggtcaggaagctggaccattt
gataatgttgttaagctacagttgtcttcttctgaaaagaggcttccgataattgtctta
cactggtgggccaacagtaaatcccggaataatagtgatggccatctcctcatttatggc
ggtgatgaaacaggatccgatgaagtcattacgatccttactcttgagtggtcgtctgga
atgcagactttgaaatgtgttggtcgtgttgacctcactcttagtggctcattcgcagat
acggtcttattaccagctactggggcaacaccaactgatgaaaaagctgctttatttgtg
ttgatgagtcctggacagctaaacctttttgattgttcaaccttgtctgatttggtatcc
aaagaggagaagaaagtatctctatcagctaaggattttcctgtagaattgccaactgtt
gatccttccatgacagtgacaaagcttgccctgttgcattcagatggaaacttagtggag
cttctgcaagagacacctttcttcaagaagttatccgcagcaacttcatctagggctagc
agatggcccttgactggaggggtgtataatcatacttctcgagctgagactaactggatt
cagagagtttttatagcaggatatccggatggatctgtaaggatgtgggatgccactcat
ccggtcttccttctcctttgtgtcttagatagagaggttaaaggtgcaaatacaataata
tcaagtgcttcagtttcaaaaatagatttctgtttcctgacattacgattggcagttggg
gatgcatctggtctggtgcgcctttatgatttcaaacatagtgatatgggaaacttccat
gttgttactgatactaaaagtgaagttcatgagttggcacaaggtcaaggacctacctgc
agagctgtgctaaagcttctcgatattcgagttaatgcaattgaatttgtaaatcatgga
gccaaacttgcagttggatacgaaaacactagggttgcagtgcttgatatgacttcatta
tcggtattgttcttatcagactccgtatctgttggtagctcttcactggtgactctgatt
gcaaagagatttgtgcatagtgatggtaatagcaaaagcccaaaacaatcagagcttcca
gaaaaccatatggaggaactcatgtttattttaactgaggatgcaaagatctatgcaatt
gatggtggtaatggtaaatcgcatggttcagggcccttgcatttaaagaaagtgtcaact
gcaatttctatgtatgtcatagaaaacaacatcccattttctggtataataaacaagcag
ccagagtctatcaaggatgatgtatctactaatgagcattcgcaggaaatgaccactcgt
gatctaagtgatacggtgccctttctagaaaatgactcctccaggaaacactttgaggag
tcctgtatcctactttgctgtaaagattcaatacgcacttatgctacaaaatctgtagtt
caaggggataataaatctgtttgcaaagtgaagctcgacaagccttgttgttggactact
acttttatgaaagatgcgaaagtttgtgcattactattactctttcagagtggagatatc
gaaattagatctttgcctgatctagagttggtggagcagacctctttaatgtcagtttta
aggtggaatttcaagccaaatatggacagggcgatgagttccatggagaatggccatatt
actctggcaaatggttctgaactggcttttgtgtccctattagccagtgaaaatgatttc
agaattccagaatatttgccgtctcttcatgatgaagtgctcgcagctgcagcagatgct
gccatgaaattctccacgcagaagaagaaacagggtgggggtccaaatattttaggtact
ctggttaaaggatttaaagtgggaaaaacgaatcatactatggatctcagtctgatgtct
aagtcaaactttagtcatctggaaggtgtttttatgaagaacccactccaccaagaactg
tccccaactaaggaagttctagaagtagagctcgatatagatgatattgaaattgatgag
cctgttcctgtggcttcttcatcatctcataacacgcaaaatagtaaaagaggaactgaa
agacaaaagttgcttgattctgagggtgatgatggcaagcccagacttaggacacgtgaa
gaaatcatagctaaatatagaaaagcgggggatgcatcatcagcggctggacaagcaaga
gacaaacttctagaacgccaagaaaaacttgagagaattagccaaagaactgatgaacta
cgcagtggggctgaagactttgcatcattggcaaatgagcttgttaaggtaatggaaaat
cgtaataaaaaatggtggcagatatga
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