Capsicum annuum (peppers): 107842897
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Entry
107842897 CDS
T04646
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cann03016
]
107842897
Enzymes [BR:
cann01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
107842897
Transfer RNA biogenesis [BR:
cann03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
107842897
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GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
107842897
NCBI-ProteinID:
XP_016542426
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Position
9:complement(31753184..31774807)
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AA seq
796 aa
AA seq
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MAVRAMNTSIILHSAATPPLIISRRCCCHRQLTTSSRHRNRSTANLHSFICCVPYPLFTH
VTVRSYSVQNLVKMVMNELASIRKRGRVRATSKLELVSTGEILEDKLKKGTLQKGLLLEF
KKDSERLLLAVALKPDGKKNWMVSDQNGITTSIKPQQVTFIVPGAENFEPTEISDFVQKA
HDNLDPALLEFAWNELLEKNKSVTVQELAEMIFGSAEPLETYCAHLLLSRDEVYFTVLES
RGLSVYGPRTANQVDELLRRKLAKEAAEKEFEELVQFLRSAKQMPPQEKPPRSSWKAEEK
TWHKIESLEAFAIDSCKNGDQKKTAGMILKAMGLAKTSSAAVNLLIDIGYFPGHVNLDLL
KLNLPTDHRDEILSAAESLLSASTDLDEADRTDLTHLKVYAIDVDEADELDDALSATRLQ
DGRIKIWIHIADPTSLVQPGSIIDKDARRRGTSIFLPTATYPMFPERLAMEGMSLKQGKL
CNAVTVSVVLHSDGSVAEYLVENSIIKPTYMLTYESATELLHLNLEEEIELKILSEAAAL
RLRWRREQGAIDTATLETRIKVTNPDHPEPSIKLYVENQADAAMRLVSEMMILCGEVMAT
FGSHNNIPLPYRGQPQSNIDTSAFAHLPEGPVRSAAIVRTMRGAEMDFRNPIRHGVLGLP
GYVQFTSPIRRYMDLAAHYQVKAFLSGDSPPFSAGELEGIASSVNMTNRVVRRLTNSSLR
YWILEYLRRQPKGKRYRALVLRFIKDRTAAILLMEIGLQASSWVSIGVQIGDEVDVQVEE
AHPRDDVLSLMEVEAV
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcgcgccatgaacacctccattattttgcattccgccgcaacgccgccgctg
attatctcccgccgctgctgctgccaccgtcaattaaccacttcttcacgacatcgtaac
cgttcgacggcgaatttacattcatttatctgttgtgtgccctatcctcttttcactcat
gttaccgttcggagctattcagttcaaaatctcgttaaaatggtcatgaatgagcttgct
tctatacggaaacgcggaagagttcgtgctactagcaagctggaattagtaagcacggga
gagatccttgaggacaagttgaagaaagggacactacaaaaaggattattgctggagttc
aagaaggactctgaaaggttgttgctagcagttgctcttaaacccgatgggaaaaagaat
tggatggtgtccgatcagaatgggattacaacctccattaagccacagcaagtaactttt
attgttcctggtgctgaaaactttgagcccacagaaatatcagattttgtacagaaagct
catgataacttggatccagcactgcttgagtttgcatggaatgagcttctcgagaaaaat
aaatcagtaacagttcaagaactagctgagatgatttttggtagtgcggagcctcttgaa
acctattgtgctcacctgctgttatcaagagatgaggtgtacttcacagttctggagtca
agaggtctttctgtatatggaccccgtactgctaaccaggtggatgagcttttgcgaagg
aagcttgctaaagaggctgcagagaaggagtttgaggaacttgtacagtttctgcgatct
gccaaacaaatgccgcctcaggaaaaacccccaagatcttcctggaaggctgaagagaaa
acttggcacaagatagagtctcttgaagcttttgccattgattcttgcaaaaacggcgat
caaaagaaaacagctgggatgattttgaaggctatgggactggcgaagacttcatctgca
gcagtgaatctcctcatagatattgggtattttcctggacatgtaaatcttgatttatta
aagttgaacctccctactgatcaccgagatgagattctgtcggccgcagagagtcttttg
tctgcatcgactgaccttgatgaggctgatagaacagacctgactcacctgaaggtttac
gctattgatgttgatgaggcagatgagcttgatgacgcattgagtgcaacaaggttgcag
gacggccggattaaaatttggatacatattgcagatcctactagtttagttcagccagga
agcataatagacaaggatgcaagaagaagaggaacttcaatattcttgcctactgcaaca
tatccaatgtttcctgaaaggttggccatggaaggcatgagtctgaaacaaggaaagctg
tgtaatgctgttactgtgtctgttgtgctgcattctgatggcagcgttgcagaatacttg
gtggaaaactcaatcatcaaaccgacgtatatgttgacatatgagagtgcaacagagctc
cttcatttgaatcttgaagaagagattgaactgaaaattctttctgaagcagctgcactc
cggttaagatggcgtcgagaacagggtgctatagacacagccaccttagaaacgcgaatt
aaggtgactaatccagatcatccagagccatcaatcaagctgtatgttgaaaaccaggca
gatgcagctatgaggctcgtttctgagatgatgatactctgtggggaagttatggccact
tttggttctcataacaacattccgttaccataccgagggcagcctcaatctaatatcgac
acatctgcatttgcacaccttccagaaggacctgttaggagtgccgctattgtccgaact
atgcgtggagctgaaatggatttcaggaatcctatacgtcatggggtgttgggacttcct
ggctatgttcaatttacctcccctattcgaagatatatggatcttgcagcccattatcag
gtaaaagcctttcttagtggtgattctcctcccttctcagctggtgagctggaaggcatt
gcgtcttcagtaaacatgacaaacagagttgtaaggaggctcaccaacagcagtcttcgt
tattggatattggaatacttgagaaggcaaccgaaagggaaacggtatcgtgccctggtc
cttagattcatcaaagatcgaacagctgcaatactgttgatggagattggacttcaagct
tcttcatgggtgtctattggtgtacaaattggtgatgaagtagatgtgcaagttgaagaa
gctcatccacgggatgatgttctctctcttatggaggttgaggcggtataa
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