Capsicum annuum (peppers): 107843061
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Entry
107843061 CDS
T04646
Name
(RefSeq) zinc finger protein JACKDAW isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cann03000
]
107843061
Transcription factors [BR:
cann03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107843061
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-C2H2
zf-met
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2H2_6
DNA_pol_viral_C
Motif
Other DBs
NCBI-GeneID:
107843061
NCBI-ProteinID:
XP_016542707
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Position
9:complement(9860154..9863344)
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AA seq
416 aa
AA seq
DB search
MMSGDLFSIHQQQVVEVPNPNNSKANSSSSKKRRNLPGTPDPDAEVIALSPKTLMATNRF
ICEICNKGFQRDQNLQLHRRGHNLPWKLKQRNKQEIVKKKVYICPEKACVHHDPSRALGD
LTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFIT
HRAFCDALAEESARITSVGTTTNTLNFNHHQQQQQQPNLPIGISQISTTFSQDFTTSNNN
CLHQKPRLSHWLNQSNTNLFSSNSAGLILPDHHHHMVQIPSPNMFNNTSSINAPMSSAPM
SATALLQKAAQIGSTKSTTTNCNFSNTFGVMNSSSSSSPSSNNVTQIFNSNTNNNVLLNG
CPDMHPQNIHFNLDNSLTRDFLGMGNEGGQPFLPQELVKFASMNSAMGLSHYTNGQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggagatttgttttcaattcatcaacaacaagttgttgaagtgccaaaccct
aataacagtaaagctaattcttcttcttccaagaaaagaagaaatcttccaggtacacca
gatccagatgctgaagttattgcactttcaccaaaaacactcatggcaacaaacagattc
atatgtgaaatatgcaacaaaggttttcaaagggaccaaaacttacaacttcatagaaga
ggacacaatcttccatggaagttaaagcaaagaaacaaacaagaaatagtgaaaaaaaaa
gtatacatatgcccagaaaaagcatgtgtacatcatgatccatcaagagcacttggtgat
cttactggtattaaaaaacattttagtagaaaacatggtgagaaaaaatggaaatgtgaa
aaatgttcaaagaagtatgcagttcaatctgattggaaagcacatacaaaaacttgtggt
actagagagtataaatgtgactgtggaactctcttttccaggaaggatagtttcattacc
catagagctttctgtgatgcattagctgaagaaagtgcaagaattacctcagttggaact
acaacaaacactctaaacttcaaccaccaccagcaacaacaacaacaacccaatttacct
attggaatatcccaaattagtacaactttttcacaagattttactactagtaacaacaac
tgtctacatcaaaaaccaagattgtcacattggttaaatcaatcaaatacaaatctcttt
tcatccaactcagctggattaatattaccagatcatcatcaccatatggtacaaatccca
tcaccaaatatgttcaacaatacatcatcaatcaacgctcctatgtcttcagcaccaatg
tcagcgacagcgcttctacagaaagcagcacaaattggctcaacaaaaagcacaacaaca
aattgcaacttctcaaacacattcggcgtaatgaactcttcttcatcatcttcaccttca
tcaaacaatgtcacacaaatctttaatagcaacaccaacaataatgtactactcaatggg
tgtccagatatgcatccgcaaaatattcatttcaacttggataatagtcttactagagat
tttttaggcatggggaatgaaggtggtcagccatttttaccacaagaattggtgaagttt
gcttcaatgaattcagctatgggattaagccattacactaatggtcaatag
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