Capsicum annuum (peppers): 107843205
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Entry
107843205 CDS
T04646
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03440
Homologous recombination
cann03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107843205
03450 Non-homologous end-joining
107843205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cann03032
]
107843205
03400 DNA repair and recombination proteins [BR:
cann03400
]
107843205
DNA replication proteins [BR:
cann03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
107843205
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
107843205
BRCA1-C complex
107843205
NHEJ (non-homologous end-joining)
MRX complex
107843205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
SPG48
Motif
Other DBs
NCBI-GeneID:
107843205
NCBI-ProteinID:
XP_047251908
LinkDB
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Position
9:complement(2084584..2104196)
Genome browser
AA seq
752 aa
AA seq
DB search
MDDSSREEENNTVRVLVATDCHLGYMEKDEVRRHDSFQAFEEICSIAEKKQAKMISLHHL
VDFVLLGGDLFHENKPSRATLVKAIEILRRYCLNDRPVQFQVVSDQTVNFANLFGHVNYE
DPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMDLGGSGVGQIALHPIL
IRKGLTSVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEGCQVSDWFNILVLHQNRVKT
NPKNAINEHFLPRFLDFIVWGHEHECLVDPQEVPGMGFHITQPGSSVATSLIEGESKQKH
VLLLEIKGNQYRPTKIPLNSVRPFEYTEVASFIHRIIYTEVVLKDEPDIDPNDHSSILEH
LDKVVRKLIERSNQKANNGSVVKLPLVRVKVDYSGFMTINPQRFGQKYVGKVANPQDILI
FSKSSKKVGKEAKFDDSERLRPEELNQQNIEALVAESNLKMEVLPVGDLDIALHNFVSKD
DKMAFYSCVQYNLEETRNKIARDSDTGKFKEDDIVLKVGECLEERVKQRSARNKDDQPFS
FSGQSLEDIRGKSSGVGSAVSFSDDEDATMLSASKSTAGKGRKDSSQSFRSSRDASEVSK
TSSRGRGRGRGRGRASSSLKQTTLDASLGFRQSQRSASIAASASVRSIAEDDENVESPSS
DEDAKQDTNVIDESSDDDKTVQGKGRKRAAPRGRGRASATAAKRGRKSDSSSSSLQRMLM
DADEDDDDDDDMAKKETRPRPRVTRNYGALRR
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcttcgagagaggaggagaacaacactgttagggtcctggttgctacagac
tgtcacttgggctatatggagaaggatgaagtacgtaggcatgattcatttcaggcattt
gaagagatatgttcaatcgcggagaaaaagcaggcaaaaatgatatctcttcatcacttg
gtggactttgtgcttctcggtggtgatctgtttcacgagaataagccatccagggcaaca
ctggtgaaagccatcgagattcttcgccgctattgtctcaatgatcgaccggtgcaattc
caagtcgttagtgaccagacagtgaactttgctaacctatttggtcatgtaaattatgaa
gatcctcactttaatgtggggttgcctgttttcagcattcatggcaatcatgatgatcca
gccggtgtggacaatctatctgccgttgatatcctttcggcatgcaatcttgttaactat
tttggtaaaatggatcttggtggttccggtgttgggcagatcgctctgcaccctattctt
atcaggaagggtttaacatcagtagctctttatggtcttgggaatatcagagatgagcgt
ttgaatagaatgtttcaaacaccacatgccgtgcaatggatgcgacctgaggctcaggaa
gggtgtcaagtgtccgactggttcaacattttggtacttcaccaaaacagagtaaagaca
aatccaaaaaatgcaataaatgagcatttcctacctcggtttctggatttcattgtgtgg
ggtcacgaacatgaatgtttagtggatcctcaggaggttccaggtatgggttttcacatt
actcagccaggttcttctgttgcgacatcactgattgagggtgaatcaaaacaaaaacat
gtactattattagaaattaagggaaatcaatatcgtccaacaaagatacctctgaactcg
gtgcgcccttttgaatatactgaggtagcttcttttatccaccggatcatctatactgag
gttgtgctgaaggatgaacctgatattgatcctaatgatcacagttcgattcttgaacat
ctggataaagtagtcagaaagttgatagaaagatctaatcaaaaggctaataatggatct
gttgtaaagctccctttagttcgagtaaaggtagactactctgggtttatgactattaat
cctcaaaggtttgggcaaaagtatgtgggaaaggttgccaatccacaggatattctcata
ttctcaaaatcttcaaaaaaggttggcaaggaagctaaatttgatgattctgagcggctt
cgtcctgaagaattgaatcagcaaaacattgaagctttagttgctgagagcaatttgaaa
atggaggtgcttccagttggcgatctggacattgccttgcacaattttgttagcaaagat
gacaaaatggctttttattcttgtgtacaatacaaccttgaggaaactcggaacaaaata
gctcgtgattcagatacggggaaattcaaagaagatgatatagttttaaaagttggagag
tgcttagaggaacgtgtcaaacaaagatctgcacgaaataaagatgatcaacctttctcc
tttagtggacagtctttggaggacattagaggcaaaagtagtggagtaggatctgccgtt
tcattcagtgatgatgaggatgccactatgctctccgcctcaaagtctactgcgggaaaa
ggaaggaaagattcatctcaatcttttagatcctctcgtgatgcttctgaagtcagcaag
acctcttcaaggggtaggggtaggggtagaggccgaggaagggcttccagtagcttgaag
cagacaacccttgatgcatctctgggattccgtcaatcacagagatctgcatcaattgct
gcatctgcatcagtgcgaagtattgccgaagatgatgagaatgtggaatctccttcaagt
gatgaggatgccaaacaggacacaaatgttattgatgaaagctcagatgatgataagacg
gttcagggcaaaggacgcaaaagggctgctccaaggggaaggggcagagcttcagcaaca
gcagctaaaaggggaagaaaatcagatagctcctcatcttcacttcaaaggatgctcatg
gatgcggatgaagatgatgatgatgatgacgacatggcaaagaaagaaactagacctcgg
cctcgggtaactaggaattatggtgctttaaggaggtga
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