Capsicum annuum (peppers): 107843221
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Entry
107843221 CDS
T04646
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03018
RNA degradation
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107843221
09123 Folding, sorting and degradation
03018 RNA degradation
107843221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107843221
03041 Spliceosome [BR:
cann03041
]
107843221
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107843221
mRNA degradation factors
5'-3' decay
Lsm complex
107843221
Spliceosome [BR:
cann03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107843221
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
RimP_C
Motif
Other DBs
NCBI-GeneID:
107843221
NCBI-ProteinID:
XP_016542947
LinkDB
All DBs
Position
9
Genome browser
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVVGTLKGYDQLLNLVLDEAVEHLRDADDPLKT
TDQKRSLGLIVCRGTAVMLVAPTDGTDEISNPFLQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcagaaaagaaacagttttagacttggcaaaatttgttgacaagggtgtgcag
gtcaagcttactggtggaagacaagtggtaggaacacttaaaggctatgatcagcttctt
aatcttgtcttggatgaagcggtggagcaccttagagatgcagacgatcccctgaagact
accgatcagaaacgaagtctcggcttaatagtctgcaggggtactgcagtaatgctcgtt
gctccaaccgatggtacagatgagatatcgaatccttttctccagccagacggggcttag
DBGET
integrated database retrieval system
