Capsicum annuum (peppers): 107843544
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Entry
107843544 CDS
T04646
Name
(RefSeq) small RNA degrading nuclease 1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107843544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cann03009
]
107843544
Ribosome biogenesis [BR:
cann03009
]
Eukaryotic type
Pre-60S particles
RNases
107843544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RRM_1
BRAP2
zf-C2HE
DUF641
Motif
Other DBs
NCBI-GeneID:
107843544
NCBI-ProteinID:
XP_016543344
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All DBs
Position
10:complement(202942316..202948790)
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AA seq
496 aa
AA seq
DB search
MEAKLESAKKEVLAEIVKLAQKREMKGNKGGWKDFLRSYDKKFGVSLSDPSKRSIDVLLA
FLKTFTPDDLKFFDKVFQCHSNRDAVEKLQKSNPESESIEQRLVRLTFEHPQYPTDYSFP
SHEKDWLVTRRSKKPKHIQSKAMVAIDCEMVLCQDGTEALVRICAVDRNLEVRLNEFVNP
NKPIADYRTEITGITAGDLDGVSCSLADVQTSMKKLLSHGTILIGHSLHNDLRALKIDHA
KVIDTSYVFKYQDQPSNRRPSLSNLCKSVLGFELRKTGSPHNCLDDACTAMKLVLAKVEG
GVDNIIPLVREEVQETETAKLLVHRIPAAVHSQELHKVIPGDFTVEVKANKKGQADKYTA
FVNFKNQHEANEAFDNLEGNQEKDTGGRPQKLISFHLDSGISGSFYVRKMEVNNYSKDTE
LAPKKRSFEDEEAVEGSKKPRIEDQSTELKEAGAGCNQCETQSKEIERLKKELSHRDEEI
SNLNKLIVNLVRKQGL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaaacttgaatcagccaagaaagaggttcttgctgaaatcgtcaagttggct
caaaagcgggagatgaaaggaaataaaggagggtggaaagattttttgagatcgtacgac
aagaagtttggggttagcttgagtgacccatcaaagaggtccattgatgtgctattagcg
tttttaaagacgtttaccccagacgacttaaagttttttgacaaggtgtttcagtgtcat
tccaaccgagatgctgtcgagaaactccaaaaaagtaacccagaaagtgaatccattgaa
cagagactggttcgtttaacttttgagcaccctcaatatccgacagattactcatttcct
tcacatgagaaggactggttagtcaccagaaggagcaaaaagcctaagcacattcaatca
aaagccatggttgcaattgattgtgaaatggtactttgccaagatggaactgaagcttta
gttagaatctgtgctgtggaccgtaatctagaggttagactcaatgaatttgtgaatcca
aacaaaccaattgcagattatcgaactgaaatcactggaataactgctggagatttagat
ggagtttcttgttcattggctgatgtacagacgtccatgaagaagctattatcacatgga
accatattaattggccatagtttacacaatgatcttcgtgctttgaagatagatcacgcc
aaagtgattgacacatcatatgtcttcaaatatcaggatcagccttctaatagaagacct
tctttaagtaacttgtgtaagtctgtgttagggtttgaacttcgaaagacgggctctcca
cataattgtctagatgatgcatgtactgcaatgaaacttgttcttgccaaggttgaaggt
ggagttgataatatcataccattggttcgtgaagaggtgcaagagaccgagacggcaaag
ctacttgtccacagaataccagcagctgttcatagtcaagagttgcacaaagttattcct
ggagactttactgtggaagtcaaggctaataaaaaagggcaagcagacaagtatactgcc
tttgtcaatttcaaaaatcagcatgaggcaaatgaggcatttgataatcttgaaggcaac
caagaaaaggataccggtggacgaccacagaagctcatttcatttcaccttgattccggt
atatcagggtctttttatgttcgtaagatggaagtcaataattattctaaagatacagag
cttgccccaaagaagaggtcatttgaagatgaagaggccgtggaaggatcaaagaagccg
aggatagaagaccaatctacagagctcaaggaggccggtgcaggttgtaatcagtgtgaa
actcagtcgaaggagattgagagactaaagaaagaactaagccacagagacgaagaaatc
tccaacttgaacaaactcattgttaaccttgtgaggaagcaaggattgtaa
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