Capsicum annuum (peppers): 107843783
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Entry
107843783 CDS
T04646
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
107843783
Spliceosome [BR:
cann03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107843783
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
107843783
NCBI-ProteinID:
XP_016543660
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All DBs
Position
10:216920624..216940583
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AA seq
444 aa
AA seq
DB search
MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDISAAVNAIQF
YSNVQPSIRGRNVYVQFSSHQELTTVEQSSQGRGDEPNRILLVTIHHVLYPITVDVLHQV
FSPHGVVEKIVTFQKSAGFQALIQYQLLQTAISARSSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDYTNPNLPAEQKGKSPQQGYGDAGAMYSVQGSGPRGVGFPQMGNAAAIAA
AFPSGLPPGISGTNDRCTVLVSNVDPDRIDEDKLFNLFSLYGNIVRIKILRNKPDHALVQ
MGDGFQAELAVHFLKGAMLFGQRLEVNYSKHPNIITGPETRDYSNSNLNRFNRNAAKNYR
YCCSPTKMIHLSTLPQDVTEEEIVVHVEEHGPIVNTKLFEMNGKKQALVLFESEEQATEA
LVCKHATSLDGSIIRISFSQLQSI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgagccgtcaaaggtcattcatgttcgcaacgtgggccacgagatctcagagaat
gacttgcttcagctatttcagccctttggagtcattaccaaacttgtaatgctcagggca
aaaaatcaggccctcttgcaaatgcaagacatttctgctgctgtaaatgcaatacagttt
tattcaaatgttcaacccagcataaggggaagaaatgtttatgtacagttctcatctcat
caagaactgacaactgtggagcagagttcgcaagggcgaggggatgagcctaatcgaatt
ctgttagttacaatacatcacgtgctttatcctataactgtggatgtgctgcatcaagtt
ttttcaccccacggagttgttgagaagattgtgacatttcagaagtcggctggttttcaa
gctttaattcagtaccagctacttcagactgctatttctgctaggagctctctccaggga
cgtaatatatatgatggctgctgtcagcttgacatacaattctcaaacctggatgaattg
caagtgaattacaacaacgagcgctctagggactacaccaacccaaatttaccagctgag
cagaagggcaaatctcctcaacaaggatatggagatgcaggagccatgtactctgtgcaa
ggttctgggcctcgtggagttggatttcctcagatgggaaatgctgcagccattgcagct
gcttttcctagcggtttgccccctggcataagcgggacaaatgaccggtgtactgttctt
gtatctaacgtagatccagatagaatagacgaggacaagctttttaatctgttctccctt
tatggaaacattgtcagaattaaaatcctacggaataaaccagatcatgctctggttcag
atgggtgatggcttccaggcagagcttgctgtgcactttttgaagggtgccatgttattt
ggccagcggttggaagtcaactattcgaagcacccaaatattatcactggaccagagacc
cgcgactactcaaactcaaatctcaatcgtttcaacaggaacgctgctaaaaactaccgg
tattgttgttcccctaccaagatgatccatctctcaaccttgccccaggacgtgacagaa
gaagagattgtggtccacgtagaggagcatggtcccattgtgaacacaaagcttttcgaa
atgaatggaaagaagcaggctcttgttcttttcgaaagtgaggagcaggcaactgaggca
ctggtgtgtaaacatgccacatctctcgatggctcgatcattcggatttcattttctcag
ctacaaagcatatga
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