Capsicum annuum (peppers): 107843802
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Entry
107843802 CDS
T04646
Name
(RefSeq) replication factor C subunit 3 isoform X2
KO
K10756
replication factor C subunit 3/5
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03030
DNA replication
cann03410
Base excision repair
cann03420
Nucleotide excision repair
cann03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107843802
03410 Base excision repair
107843802
03420 Nucleotide excision repair
107843802
03430 Mismatch repair
107843802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cann03032
]
107843802
03036 Chromosome and associated proteins [BR:
cann03036
]
107843802
03400 DNA repair and recombination proteins [BR:
cann03400
]
107843802
DNA replication proteins [BR:
cann03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107843802
DNA Replication Termination Factors
ELG1-RFC complex
107843802
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107843802
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107843802
Check point factors
HRAD17(Rad24)-RFC complex
107843802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
DNA_pol3_delta2
nSTAND3
EnY2
COMPASS-Shg1
Motif
Other DBs
NCBI-GeneID:
107843802
NCBI-ProteinID:
XP_016543683
LinkDB
All DBs
Position
1:199161225..199166793
Genome browser
AA seq
674 aa
AA seq
DB search
MVTDMETVTTTTTTKWISETQNSLIIPPTVRSTYSADSVKPTWAKKVDEGRKGSSSSKNS
RSLTANNVKEFNKRNVIQEEKRYSPRSPYYKGLTDSSKEINRQKLLAEFSNNHGKDSNLS
AFSTSSGSKSNLAIKVQEWSASYFVRKGKEERTSSYLNVSSGNKNIQDPSSSETRDKRVI
RTTIGEELGIHSKAVRNCARKSKRRIPQLDHQGKPLRERASEMQTDIVTLPAPEPPITSL
PKLSLPSPPPTPLIIQTSSQDKEIESVLSLPVSPTQIVDDEKDTIKENDITVPAEQVEKR
FVWAAKYRPDALKDFLCNRNTALELKALAEIDGSTRHFIFAGHPGVGKRTMIFALLCELF
GHDKVQAREKYKVFNLKGEAVPSIQVNVKESKKHVEINLSETKGYEKHVIVDLINEKKHK
SSRRSAPCNSENSKAIILCEADKLSTDALLYIKWLIERYAGCCKIFFCCSDLTKLQPIKS
ICKVVHLQKPSDDEIVDVLQFIAKQEGIELPDQIAATIASNSKSNLRQAIRSFEATWHFN
TSLQEIKTGWEDDIAEIAKNIIEEQSPKQLYDIRGKLQNLIEHNVSAEFIFNTLVDELKS
NLDGQYHKEMDILKMKYNINLNDLEQGTIDNDAVKKIVHKFMKIEEFIAKFMSWYKIFVL
KKGNHNAILSKGGI
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggtaacagatatggaaacagtaacaacaacaacaacaacaaaatggatatcagaaact
caaaattcactcataataccccctacagtcagatcaacatattcagctgactcagtgaaa
ccaacatgggctaaaaaagtcgatgagggaagaaagggaagttcgtcttcaaagaactcg
aggagcttaacagctaataatgtgaaggaattcaacaaaagaaatgtgattcaagaagaa
aagagatactctccaagaagtccatattacaaaggacttactgattcgtccaaagagatt
aatcgacaaaaactgttagcagagtttagtaataatcatggaaaagatagcaacctatca
gcgttttcaacaagttccggttctaaatcaaatttagctatcaaggtacaagaatggagt
gcatcttactttgtacgcaaaggcaaagaagaaagaacatcgtcctacttgaatgtttct
tctgggaacaagaacatccaggatccttcttcatctgagacaagagataaaagagtaatc
agaactacgattggagaagaacttggtatacattcgaaagcagttagaaattgtgcaaga
aaaagcaaacgtagaattccacaattagatcatcaggggaagcctttgagggagagagca
tcagaaatgcaaacagatatagtaacactaccagccccggaaccaccaataacgtcacta
ccaaagttgtcattaccatctccaccaccaactccattaataatacaaacatcatcgcaa
gataaagaaattgaatcagtactatcattgccagtttcaccaactcaaattgtagatgat
gaaaaagataccataaaggagaatgatattacagttcctgcagaacaggttgagaaaaga
tttgtgtgggctgccaagtatagacctgatgctctgaaagactttctatgcaatcgaaat
actgcactagaattgaaggctttggcagaaatagatggcagtactcgtcattttatattt
gcaggacatccaggagtggggaaaagaaccatgatatttgctctactttgcgaacttttt
ggacatgacaaagtgcaggcaagagaaaagtacaaggtgttcaacttaaagggagaagca
gtgcccagcatacaagtaaatgtgaaggaatcaaagaaacatgttgagatcaatctctct
gaaactaaaggctacgagaaacacgtcatagtagacctaatcaatgagaaaaaacacaaa
tcatccagaagatccgcaccttgcaactctgaaaactctaaagctatcattctttgtgag
gcagacaagctatcaacagatgccttgctatatattaaatggctgatagagagatatgca
ggctgttgcaagatcttcttttgctgcagcgatttaacaaagcttcagccaattaagtct
atttgcaaagttgttcatctccaaaaaccttcagatgatgagattgtagacgtcttgcaa
ttcatagcaaaacaggaaggaatagaattaccagaccaaatagcagcgacgattgctagt
aactctaaaagtaacctacgccaagcaattcgctcttttgaagctacctggcacttcaac
acttccttgcaagaaatcaagacagggtgggaagacgacattgcagagatcgctaaaaac
ataattgaagagcaaagcccaaagcagctatacgatatccgtgggaaattgcagaactta
atagagcacaacgtatctgctgagttcatctttaatactctggttgatgaactaaagagt
aatttagatggccagtaccacaaagaaatggacattctgaaaatgaagtacaatataaat
ttaaatgaccttgagcaaggtacaattgataatgatgcagtgaaaaagattgttcacaaa
tttatgaaaattgaagagttcatagctaaattcatgagctggtataagatttttgttctg
aagaaaggaaatcacaacgccatcctctccaaagggggtatatag
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