Capsicum annuum (peppers): 107843846
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Entry
107843846 CDS
T04646
Name
(RefSeq) transcription initiation factor IIB isoform X2
KO
K03124
transcription initiation factor TFIIB
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107843846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107843846
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
107843846
Prokaryotic type
Archaeal type
TFB
107843846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
RB_B
PucR-like_N
Ribosomal_S27e
A2L_zn_ribbon
DmmA-like_C
Zn_ribbon_8
PP1
Motif
Other DBs
NCBI-GeneID:
107843846
NCBI-ProteinID:
XP_016543734
UniProt:
A0A1U8EIN0
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All DBs
Position
10:217825467..217840537
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AA seq
312 aa
AA seq
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MGDTYCSDCKRNTEVVSDHAAGDTVCSECGLVLESRSIDEKSEWRVFADESGDHDPNRVG
GPVNPLLGDVGLSTVISKGPNGSNGDSSLARLQNRGGDPERALVMAFKAIANMADRLSLV
STIKDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKARTVKEICSIANGATKKE
IGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNIGMNHEEIKAVQETVKKSEEFDI
RRSPISIAAAIIYMLTQLTDSKKPLRDISLATTVAEGTIKNAYKDLYPHASKIIPEWYLK
DKDLKSLCSPKA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatacatactgttcagactgcaaaaggaacacagaggtagtctccgaccacgca
gcgggagatacagtttgttcggagtgtggactcgtactggaatcgaggtcaattgatgag
aaatctgagtggcgtgtttttgctgatgaatctggtgatcatgacccgaatcgtgttggt
ggacccgttaacccgttacttggtgatgtgggtttatctactgtaatttccaaagggccg
aatgggagtaatggggattcctctttagctaggttgcagaatcgtggtggtgatcctgaa
cgtgccctagttatggcgtttaaagccattgccaacatggctgataggctgagccttgtt
tctaccataaaggaccgagcaagtgagatatacaaaaggctcgaagaccagaagtgtacg
agaggaaggaatctggatgccttggtggctgcttgtatttacattgcgtgtcgacaagaa
ggcaaagcacgcactgtaaaagaaatatgctcaatcgccaatggagctacaaagaaagaa
attggccgagcaaaagagttcattgtgaaacaattgaaggttgaaatgggagaatcaatg
gagatggggactatacatgctggagactatctgagacgtttctgttctaacattggaatg
aaccatgaagagattaaggctgtccaggaaactgtcaagaagtcagaagagtttgatatc
aggaggagtcctatatcaattgctgcagctattatatacatgctaacacagcttacggat
tcaaagaaacccctccgagatatctcacttgcaacaacagttgcagaagggactatcaag
aatgcatacaaggatctctatccacatgcttctaaaataatacctgagtggtatctcaag
gacaaggaccttaagagcctctgcagtcccaaggcttag
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