Capsicum annuum (peppers): 107843916
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Entry
107843916 CDS
T04646
Name
(RefSeq) transcription initiation factor IIB-2 isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107843916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107843916
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
107843916
Prokaryotic type
Archaeal type
TFB
107843916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
RB_B
PucR-like_N
DUF7573
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
107843916
NCBI-ProteinID:
XP_016543831
UniProt:
A0A1U8EBN6
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All DBs
Position
10:complement(219230894..219235087)
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AA seq
313 aa
AA seq
DB search
MDTYCSDCKRSTEVVFDHAAGDTVCSECGLVLESRSIDETSEWRTFADESGGDDPNRVGG
PVNPLLGDAALSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVVAFKAIGTMADRLSLVS
TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRTVKEICSIANGASKKEI
GRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDIR
RSPISIAAAIIYMITQLSDSKKPILRADISIATTVAEGTIKNAYKDLYPHASKIIPEWYV
KDKDLKSLCSPKA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggatacgtactgttcggactgtaagaggagtacggaggtggtattcgaccacgcggcg
ggtgatacggtgtgttcggagtgtggattggtattggaatcgagatcaattgatgagaca
tcagagtggagaacgtttgctgatgaatcgggtggtgatgacccgaaccgtgttggtgga
ccggttaacccgttactaggtgatgcggcgttatcgacagtgatatcaaaaggaccaaat
gggagtaatggtgatggttcactagcgaggttgcagaatcgtggtggtgatcccgatcgt
gctattgttgttgcttttaaagctattggtactatggctgataggttgagccttgtttct
actataagggatcgagcaagtgagatatataagaggctggaagaccaaaagtgtacaaga
ggcaggaatcttgatgctctggtcgctgcttgtatctacattgcttgccgccaagaaggc
aaaccccgcactgtaaaagagatatgctcaattgccaatggagctagtaagaaggaaatt
ggccgagcaaaagagttcattgtgaaacaactgaaggttgaaatgggagaatcaatggag
atgggaactatacacgctggggactatctgagacgtttttgttctaaccttggtatgaac
catgaagaaattaaggttgtccaagaaactgttcagaaggcagaggagtttgatataagg
aggagtcctatatcaattgctgcagcaataatatacatgataactcaactttcagattcg
aagaaacccattctgcgagcagatatctcaattgcgaccacagttgctgaaggaactatc
aaaaacgcgtacaaggatctttatcctcacgcgtccaaaataattccagaatggtatgtc
aaagacaaggacctcaagagcctgtgcagtccaaaggcgtaa
DBGET
integrated database retrieval system
