Capsicum annuum (peppers): 107843917
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Entry
107843917 CDS
T04646
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107843917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107843917
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
107843917
Prokaryotic type
Archaeal type
TFB
107843917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
HTH_Tnp_ISL3
DUF7573
HTH_5
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
107843917
NCBI-ProteinID:
XP_016543833
LinkDB
All DBs
Position
10:complement(219222236..219228038)
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AA seq
311 aa
AA seq
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MDAYCTDCKKSTEVVFDHSAGDMVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGD
PTNPLLSDGGLSTVISKPNGTTSDFLTSSLGRWQSRGSNSDRSLILAFKAIGVMSDRLGL
VATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGASKK
EIGRAKEYIVKQLELEMGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQEAVKKSEEFD
IRRSPISIAAAVIYIVTQLSDDKKPVKDVSLATGVAEGTIRNSFKDLYPYLSKIIPSWYA
QGQDLKNLSSP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgtattgtacggactgtaagaagagcacagaagtggtgtttgatcattcagca
ggagatatggtatgttcagaatgtggtttagttttggaatcacattcgattgatgaaaca
tcagaatggagaacttttgctaatgagtctggtgataatgatcctgttcgtgttggagat
cctactaatcctttgctgtctgatggtggtttatcaactgtgatctcgaagcctaatgga
actactagtgatttcttgacgtcttctttgggtcgatggcagagtcgtgggtcgaattct
gatagatctcttatcttggcttttaaagccattggtgttatgtctgataggttgggcctg
gttgcaaccataaaggaccgagctaatgagatatacaagaaggtagaagatcaaaaatct
agtagaggaaggaaccaggatgctatattggctgcttgcttatatattgcttgtcgacaa
gaagataagcctcgaactgtgaaggaaatttgctctgtcgcgaatggagcttcaaagaag
gaaattggccgagcaaaggaatacattgtgaaacaactagagctcgagatgggtcaatct
gtggaaatgggaactatacatgctggagatttcatgcgacgcttttgttcaaatctcggg
atgacaaatcagacagttaaagccgctcaagaagctgtaaaaaaatcagaggagtttgac
ataaggagaagtcccatttcgattgctgcagcagttatctacatagtcactcagctttcg
gatgacaagaagccagttaaagatgtttcacttgcaactggagttgcagaaggcacgatc
cggaattcattcaaggatctatacccttatctctcaaagattataccaagttggtatgca
caaggtcaggacctaaagaacctcagcagtccttga
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