Capsicum annuum (peppers): 107844065
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Entry
107844065 CDS
T04646
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03030
DNA replication
cann03410
Base excision repair
cann03420
Nucleotide excision repair
cann03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107844065
03410 Base excision repair
107844065
03420 Nucleotide excision repair
107844065
03430 Mismatch repair
107844065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cann03032
]
107844065
03036 Chromosome and associated proteins [BR:
cann03036
]
107844065
03400 DNA repair and recombination proteins [BR:
cann03400
]
107844065
DNA replication proteins [BR:
cann03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107844065
DNA Replication Termination Factors
ELG1-RFC complex
107844065
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107844065
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107844065
Check point factors
HRAD17(Rad24)-RFC complex
107844065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
Sigma54_activ_2
Mg_chelatase
AAA_lid_RFC1
AAA_16
AAA_5
RuvB_N
RsgA_GTPase
ABC_tran
AAA_22
AAA_23
DUF815
nSTAND6
AAA_29
AAA_2
T2SSE
AAA_24
NB-ARC
ATPase_2
TsaE
Motif
Other DBs
NCBI-GeneID:
107844065
NCBI-ProteinID:
XP_016544043
UniProt:
A0A1U8E9Y1
LinkDB
All DBs
Position
10:221641414..221651313
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDKVIVHQDVAQNLQKLVSEGDCPHLLFYGPSGSGKKTLIMALLRQIFG
PSADKVKVENKVWKVDAGTRTIDVELTTLSSTHHVELNPSDAGFQDRYVVQEIIKEMAKN
RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLVLCSNSSSKVTEAVRSR
CLNVRINAPMEEEIVNVLEFIAKKEGLQSPQGFAARIAEKSNRNLRRAVLTFETCRVQQY
PFTNNQAIPPMDWEQYVSEIASDIMKEQSPKRLFEVRGKLYELLTNCIPPEIILKRLLFE
LLKKLDSELKHEVSNWAAHYEHRMRLGQKAIFHLEAFVAKFMSIYKSFLISTFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggttgacaagtaccgccctaaaaccctagacaaagttattgtacaccaggat
gttgctcaaaatcttcaaaaactggtttcggagggagattgtcctcatctcctcttttac
gggccttccggctcagggaagaaaactttgattatggcacttcttagacagatttttggt
cccagtgctgataaggttaaggttgagaacaaggtttggaaagttgatgctggtacacgg
acaattgatgtggagctcacgacattgtcaagcactcaccatgttgaattaaatccaagt
gatgcgggatttcaggacagatatgttgttcaagagataatcaaagaaatggccaagaat
agaccaattgacacgaaagggaaaaaggggtttaaagttttagtgctaaatgaagttgac
aagctctcaagagaagcacaacattctcttcgaagaacaatggagaagtacagtgcatca
tgtcgcctggttttatgctccaacagttcttcaaaggttactgaagcagtccgctcacga
tgccttaatgtgcgaataaatgcaccaatggaggaagagattgttaatgttttggagttt
attgccaaaaaggaaggacttcaatctccgcaaggatttgcggcccgcattgcggaaaag
tcaaataggaatctgaggagggcagttttgacatttgagacttgtcgtgttcaacaatat
ccctttacaaacaaccaagctatacctccaatggactgggagcaatatgtttcagaaatt
gcatcagacataatgaaagagcagagccctaaaaggttgtttgaggttagaggaaagtta
tacgagctactaactaattgtattccacctgaaattattttgaagaggctgcttttcgaa
ctattaaagaaattggattcagagttgaagcatgaggtgtccaactgggctgcccattat
gagcataggatgcgccttggacagaaggctatatttcatcttgaagcatttgtggccaaa
ttcatgagcatctacaagagtttccttatttctacatttggctga
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