Capsicum annuum (peppers): 107844790
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Entry
107844790 CDS
T04646
Name
(RefSeq) RING-H2 finger protein ATL40
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107844790
Enzymes [BR:
cann01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107844790
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
107844790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
Prok-RING_1
Baculo_RING
zinc_ribbon_16
DUF2417
SLX1_C
RINGv
COX14
DUF6728
Motif
Other DBs
NCBI-GeneID:
107844790
NCBI-ProteinID:
XP_016544623
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Position
10:6969824..6971212
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AA seq
239 aa
AA seq
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MGFVGDEDDIPFVHQKNKHNINTKFMINTLITISLVVFLVSIIRLYIKFLFRHRQAQGQA
TNYGSRISNVTSVSQVEPPKHGLDPSIMTSLPIFLYKKSEQDTIECSICLSTIEDGELVR
ILPNCKHSFHVECIDKWFDCHSTCPICRAEAKPRRLSPEPREDVVGRISSSTPPMESGNL
CITVNLEGTSSSGNGASSRLSSFKSIIILSRERSFQGLQAQSCSREDHVGDLESGGSRI
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgttggtgatgaagatgatattccatttgttcatcaaaagaacaaacataat
atcaataccaaattcatgatcaataccttaattacaatatccctagttgttttcctcgtt
tctattattcgtttgtacattaaatttcttttcagacatcgtcaggcccaaggccaggcg
acgaactacggttcccgaatttctaacgtgacgagtgtatcacaagttgagccacctaaa
catggtcttgacccatccatcatgacttcgctaccaatatttctttataaaaaaagtgaa
caagacactattgagtgttcaatttgtttgagtactattgaagatggtgaattggttagg
attttgcctaactgcaagcatagttttcatgttgagtgtattgacaaatggtttgattgt
cactcaacatgccccatatgccgggccgaggcgaaacctcgccgcctatcgccagagcct
agggaggacgttgttggtcgtatatcgtcatcaacgccacctatggaaagtggaaacttg
tgtataaccgtgaatcttgaagggacttcgtcttcaggaaatggagcaagttcgagattg
agctcgtttaaaagtattattattcttagtagggagagatcatttcaaggacttcaagct
caatcttgttctagagaagatcatgtaggtgatcttgagagtggcggatcaagaatttag
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integrated database retrieval system