Capsicum annuum (peppers): 107844798
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Entry
107844798 CDS
T04646
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107844798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107844798
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107844798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
CUX1_N
COG3_N
Motif
Other DBs
NCBI-GeneID:
107844798
NCBI-ProteinID:
XP_016544632
UniProt:
A0A1U8EBP2
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Position
8:35638649..35648745
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AA seq
748 aa
AA seq
DB search
MSTGFSFSSSTATTSSASGSNPFSMAFPSPNSAASAPSFGFGNSASSASSAPPFGLGSST
AASGSAPAPSLFGSTSGSGMTTSLFGSTASASSSPLFGVNSATAAASSSPFSGGSSTFGS
SSAPSSGLFGSSSGSGSGLFGSSSGLFGSSSSSGSGLFGSSSGSGSGLFGSSSGSGLFGS
SSSFSSSTGAASTGTAATSASTNPFSSSVFGSSSASSSSPFGGLSTASPFAFPSSTASSI
SASSSASSSSSFSFASSAPASSFSSSSTFSFPGASPASSASSAPAFSLFSSSTTSSVSAP
GFSLTTASASSAASTPSFSFSTSSLAASAPTFSLSTPSSAASGSAFSLSTPSSTAPAPAP
APAISFSMPATASSSPSLFSPSTGLSFSVAKASESSVTASASSSSAPVSTPASAGFSFGS
SPLFSTSTTTPSISTTVVATTGASSTTSGTGFSLTFPASTSSASTTSAVSPSTSFSLSDK
ASAPASSSPSQSTAALPSFGVPSTTSGTATSSAAQTSSALTVASSSGTTSTSTVAVTSTP
KLPSEITGKSVEEIIKEWNAELQERTAKFRKQAHAIAEWDKRILQNRDILLKLESEVAKV
VETQDSLERQLELIETHQDEVDKALQSMEEEAERIYKDERGVILDDEAASTRDSMYEQAE
FVERELEKMTEQIKSIINTLNASQGGELEATDGMTPIDVVVRILNNQLSSLMWIDEKAEE
FSSRIQKLESEGSAAKCELTGPKLWLTR
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccggcttttcattctcctcttccactgctacgacgtcgtccgcttccggttct
aacccattttccatggcctttccaagccctaattccgccgcctctgctccgtctttcggc
ttcggtaattctgcttcttcagcctcttccgctcccccttttggtcttggttcttctacc
gctgcttcaggttccgctcctgcacccagtctatttgggtcaacttccgggtcgggtatg
acgacgagcctattcggatccactgcttctgcaagtagttcgccgctgtttggggtgaat
tcagctactgccgctgctagttcatccccatttagtggtggttcttcgactttcgggtcg
tctagtgcgccgtcttcgggtttgtttgggtctagttcgggttctggttcgggcttgttt
gggtctagttcgggtttgtttgggtctagttcgagttctggttctggcttgtttgggtct
agttcgggctctggttcgggtttgtttgggtcaagttcgggttcgggtttgtttggttct
tcttcgtctttttcgtcatcaactggtgctgcgtctactggaacagcagcaactagtgct
agtacaaatccgttttcttcatctgtgtttgggtcttcttctgcttcttcatcttcacct
tttggtggattatctacagcttctccatttgcttttccgtcatcaacggcctcctcgatt
tcggcgtcgagttcagcttcttcttcatcttcattttcgtttgctagctcggcaccggcc
agttcgttttcctcttcatctacattttccttccctggcgcttcacccgcaagttcagct
tcttctgcaccggcattttcattgtttagttcttcaactacctcttctgtatctgcacct
ggattttcacttactactgcatcagctagttctgcagcgtccacaccatcattttcattt
tcgacctcgagcttagcagcatcagctccaacattttcattatcaaccccgagttcagca
gcatcaggttcagcattttcattatcaaccccgagttcaacagcacctgcacctgcacct
gcacctgcaatttccttttccatgcctgccacagcttcttcgtccccatcactgttttca
ccttctacgggtctgtcattttcggttgcaaaagcgtcagaaagctctgtaacagcttct
gcttcttcttcaagtgctccggtgtcaacacctgctagtgctgggttttcatttggctca
tcgcctttgttttcaacttctactaccacccctagcatttctacaactgtagttgctact
actggagcttcttctacaacttctgggactggtttttctctgacatttccggcgtccact
tcttcagcttcaactactagtgctgtttctccatccacaagtttttcgttgtctgacaaa
gcatctgcaccagcttcatcctcgccatctcaatcaactgcggctctgccaagctttggt
gtcccaagcacaacttctggaactgcaacaagttcagctgctcaaacatcatcagccttg
actgtggcttctagtagtgggaccacttcaacttctactgtagctgtcacttctacaccg
aaattaccatcagaaattacaggaaagtctgtagaagagatcatcaaggaatggaacgct
gagctgcaggaacgcactgcaaaatttagaaagcaggctcatgcaatagctgagtgggac
aaaaggatcttgcagaatcgtgatattcttctcaaacttgagagtgaagttgcaaaggtt
gttgagacacaagacagcttagagcggcagctggagctaattgagactcatcaggatgag
gttgacaaggcattgcaaagcatggaagaagaagctgagcgaatttataaagatgagaga
ggagtgattcttgatgatgaagctgcatcaacaagggattcaatgtatgaacaggctgag
tttgtggagagggaattggagaagatgacagagcagatcaagtcaatcattaatactctt
aatgccagccagggtggagaacttgaggcaactgatggaatgacaccgattgatgttgtt
gtccgaatcttgaacaatcaattgagttcattgatgtggattgatgaaaaggctgaagaa
ttctcatctcgtattcagaagcttgaaagcgaagggtctgctgccaaatgcgaattaacg
ggccctaaattatggttgactcggtga
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