Capsicum annuum (peppers): 107845045
Help
Entry
107845045 CDS
T04646
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
107845045
Spliceosome [BR:
cann03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107845045
Other components
Complex C specific factors
107845045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Mis12
Motif
Other DBs
NCBI-GeneID:
107845045
NCBI-ProteinID:
XP_016544813
LinkDB
All DBs
Position
10:complement(1056560..1059580)
Genome browser
AA seq
864 aa
AA seq
DB search
MDDYQEMERFGMENDYEDGQWIGGEFYYRKRKEKNKVQTKDDVLYGVFASGDSDSDYEGS
SSKKRKKGLLSKLDLTKPVNFVSTGVVMPNREIDQNSKEENNDSNNNNQLLSEESSKGLG
FGSNNNNANGDGVDADDVEADEGNFLPTAFGRKIKEGALRREKEREKEKSSKASKASAFD
SGRKGDVGGDVGGFEKYTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEAKLRPKNMGMGF
NDYKETTSAPAIQESDGKVVVDRPGIVVEGRSKEKAWSKQTKKVKKVYVTAEELLAKKQE
QGLEVVQKVFDMRGPQVRVLTNLENLNAEEKARENDVPMPELQHNIRLIVDLAELDIQKI
DSDLRNEMETIVTLQKEKEKLQAEAARQKRQFDNMEEVVGVLDRIGEESTSGTLTLDSLA
KAFADLQKQYAEEYTLCNLSSIACSYAVPLFIRIFQGWDPLQTPIHGLEVVSLWKDLLQG
ADIFAISDAASPYTQLFMEVVFPAIRISGTNTWQARDPETMLRFLESWEKLLPPAVLQTI
LENIVLPKLSAAVDSWDPRRETVPIHSWVHPWLPLLGQRLESCYHTIRNRLESVLHAWHP
SDMSAYYILSPWKTVFDAISWEKLMVRFIVPKLLAVMHEFQINPANQNLDHFYWVRTWAT
AIPIHHMLPILDIFFNKWQEVLYHWLCSNPDFEEVTKWFLGWKELIPPELQANEHVRYRL
NLALGMMDKAVEGAEVVQPGLRENISYLRVLEQRQFETQKKAAAQAQSRTSVGSNSGIQM
DGTGGGADMSMKEVIEVHAQENGLLFKPKPGRMQDGHQIYSFGNMSIIIDSLNQKVFAQV
EDRWTFVSLEQLLDLHKRSGIKRR
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaggagatggaaaggttcggtatggagaacgattacgaagacggacag
tggatcggcggcgaattctactatcggaagcgtaaggagaagaacaaggtacaaacgaag
gacgacgtgctttacggagttttcgcttcgggcgatagcgattctgactacgagggatct
tcgtcgaagaagcggaagaaaggcctcttatcaaaacttgacttgacgaagccagttaac
ttcgtgtcaactggagtggtcatgccgaatagagaaatcgatcagaattccaaagaggag
aataatgatagcaataacaacaatcagttattgtcagaagagagcagtaagggtttgggt
tttggtagtaataataataatgctaatggtgatggtgttgatgctgatgatgttgaagct
gatgaggggaattttctgccaacggcgtttggtaggaagattaaggaaggtgcgttaagg
cgagagaaggagagggagaaggagaagtcaagtaaggctagtaaagcgtctgcttttgac
tcggggaggaagggtgatgttggtggtgatgtgggtggatttgagaagtatacgaagggg
attgggatgaagttgcttgagaagatggggtataaaggaggtggattgggtaaaaatgag
caaggaattgtggctccgattgaggcgaagttgaggccgaagaatatgggaatggggttt
aatgattataaggagacgactagtgcaccggctattcaagaatcggatggaaaggtggtt
gttgatcgtcctgggatagtcgtggagggacgatcaaaagagaaggcttggtcaaagcaa
actaagaaagtgaagaaggtttatgttacagcggaagagttgttagctaaaaaacaggag
cagggattggaagttgttcagaaggtgtttgatatgaggggtccacaagttcgagtcttg
acgaatttggagaacttgaatgctgaagaaaaagcgagggagaatgatgttccaatgccg
gaacttcagcataatattaggttgattgtcgatttggcagaacttgacatacagaaaatc
gatagtgatttgaggaatgagatggagactattgttactttgcagaaggagaaggagaag
ctacaagcggaggcagcgcgacagaaaaggcagtttgataatatggaagaggttgttggt
gtattggaccggataggggaagagagcacatctggtaccctaacgttggactccctcgcg
aaagcgtttgcagacttgcagaagcagtatgctgaggaatacacactctgcaacttgtct
agcatagcgtgctcgtatgcagtgcctttgtttattcgaatttttcagggatgggatcca
cttcaaactccaatacatggattggaagtggtttcgctgtggaaagatcttttgcaaggt
gctgacatttttgctatctctgatgctgcatctccttatactcaactatttatggaagtt
gtattccctgctattagaatatctggcactaatacctggcaggcaagggatcctgaaacg
atgcttcgttttttggagtcttgggagaagttgttgcctcctgcagtccttcagacaata
ctggaaaacattgttttacccaagttgtcagctgctgtggactcctgggatccacgtcga
gaaacagttccaatccattcttgggttcatccatggttgcctttgttaggtcaaagattg
gaaagttgctaccacactatacgtaacagattggaaagtgtattgcatgcttggcaccca
agtgatatgtctgcatactatatattgtctccttggaagactgtgtttgatgctattagc
tgggaaaaactaatggttcgatttattgttccaaagttgttagcggtgatgcatgaattc
caaataaatccagcaaatcagaatcttgatcatttctattgggttcgtacttgggctact
gctattccgatccatcacatgcttccaatactggatatattcttcaacaagtggcaagaa
gttttgtaccattggttatgctcaaacccggactttgaagaagtgacgaaatggtttttg
ggttggaaggaacttattccacctgaacttcaggcgaatgaacatgttcgctatcgactt
aatcttgctctaggaatgatggacaaggctgttgaaggcgcggaggtagttcaacctggt
ttgagggagaacataagttatcttagggttcttgaacaaaggcaatttgagactcagaaa
aaagcagcagcacaagctcaatcccgcacttctgtgggctcgaacagtggtatccaaatg
gatggtacaggcggtggagctgacatgagcatgaaagaagttattgaagttcatgctcaa
gagaatggtttgctgttcaaacctaagcccggcaggatgcaagatggtcatcagatatat
agttttggtaacatgagtattattatagattctctcaatcagaaggtatttgcgcaagtt
gaggacaggtggacttttgtgtcacttgagcagcttttggatctacataagcgttctggg
ataaagcgccgatag
DBGET
integrated database retrieval system
