KEGG   Capsicum annuum (peppers): 107847501
Entry
107847501         CDS       T04646                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03030  DNA replication
cann03410  Base excision repair
cann03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107847501
   03410 Base excision repair
    107847501
   03420 Nucleotide excision repair
    107847501
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cann03032]
    107847501
   03400 DNA repair and recombination proteins [BR:cann03400]
    107847501
Enzymes [BR:cann01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     107847501
DNA replication proteins [BR:cann03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    107847501
DNA repair and recombination proteins [BR:cann03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      107847501
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 RNase_H_2 DNA_pol_B_exo2
Other DBs
NCBI-GeneID: 107847501
NCBI-ProteinID: XP_016547269
LinkDB
Position
11:230223369..230252188
AA seq 2219 aa
MNAAENSRRWDRRDSTRFSKKQKLILNSEEQLESKLGFDVFTEGDKRLGWLLTLSSSSWE
DQETHKVYSCVDLYFVCQDGSTFKVKYRFRPYFYVATKDKMEMDVDSYLRRRYESKIADI
EVLEKEDLDLKNHLSGLHRSYLKISFDTVQQLMDVKRDLTHIVERNQSKFDTIEAYESIL
TGKSKQRSQDFIDYITDLREYDVPYHVRFSIDIDVRCGQWYDVSVSSSGVMLEKRTDLLQ
RAEVHVCAFDIETTKLPLKFPDAEYDSVMMISYMVDGHGYLIINRECVAEDIEDIEYTPK
PEYEGHFKVTNVKNEEGLLRHWFAHMQVVKPGIYVTYNGDFFDWPFVETRAAHYGLSLKD
ELGFSCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDM
VRFAKEKPQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEML
LMVQAYKANVICPNKHQSDPEKFYGSQLLESETYIGGHVECLESGVFRSDIPTSFKLDPS
AYELLINNLDRDLQYAIIVEGKMDLESVINYGEVKNAIMEKLMSLRDNPLREECPLIYHL
DVAAMYPNIILTNRLQPPSIVSDEICTACDFNRPGKKCLRKLEWVWRGEMYMAKRSDYYH
IKRQLESELVEVGDGQRSKSFLDLPKAEQQVKIKDRLKKYCQKAYKKVLEKPVTEVREAG
ICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSINIQEAQDLVVLYDSLQ
LAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIW
CALPGSFPENYTFKTKDPKKKLTISYPCVMLNVDVARNNTNDQYQTLKDPINKTYTIHSE
CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ
AELFDKFLHGSTLEECYSAVASVADRWLDLLDNQGQDIADSELLGYISESSTMSKSLADY
GEQKSCAVTTAKRLADFLGDAMVKDKGLLCQYIVACEPKGTPVSERAIPVAIFETNAEIM
RFYVKKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLH
KKVREKEDKFRQRKLNDIFSSVNRDDTVASTHSKNQQNCEDLEDFRQSGKSSKSGPRPVV
HRHAVNKEHPVHTSDQLDSRQQDGHASSPSKMLPSQEIAAVEDIDRNVDYHGWLQQKKRK
WKEIREERKRQRLDTSRTVNHVNGSADMLHSMVNRKRPGKTGVSSYFERHELALTRSHWQ
IVQLEPTSQHGQFFAWVVVEGIMHKIPVTVPRVFYLNSKAPITEEFPGRRVNKILPHGCH
SYNLIEVTIDEDQFKSESKKLAAHLADPEVEGIYETKVPLEFSAILQMGCVCKVDKATKK
RNPQDGWSLSELHMKTTAECPYLDQSIAFFYLYHSASDVRAIYVGHFPASKMIHVVVVNP
FQNKELSPHILERHFYEGCQTLSGQPITQKDGVSFKVDYVGYIKDAERILKRTINENRHH
GPAVAMIECPNAHLLKSGIRALEDFPCISIPCNARDSQYQALGWQNVAAKIGMQRCATSS
RWLNERITLSRYAHVPIGNFDVDWLMHTADIFFSRALRDQQQVLWISDNGIPDLGGVNDE
VSSFMDEVNQPVLIYPGAYRKVTVELKIHHLSVDALLKSNQVNEMEGGTLFGLDQEVNPT
TDFTNEQYFSDATTSCAPAFRVLKQLIQRCITDAVTSGNIFADAMLQHLYRWLCSPRSRL
HDPALYSMLHKVMQKMFALLVAELRKLGAGIVFASFSKIIIDTGKSDISAAKAYCDNVIK
NVQTRELFEWIELEPLQFWHSLLFMDQYNYGGIQAKHSDGPVEVNSESGEESVCGESQVD
IVSSWNIAENLPKATQDHFILIVSEFMYIPWKYAQEHAALRASSSDGDFCTPSITAALAE
TFDLQMADDLKKKIRTYFTDKLLKIVCDPNLQMKVLNNSQKNQETPDANSQPYSHVEKGD
PALEFIKHVSAVLALDQNVQHEVLIMRRNLLKLVRVREFAPEAEFRSLSVSYTLPNVICS
YCNDCRDLDLCRDRALISHEWRCIVPQCGQPYDREAMENALVQIVRQRERLYHLQDLICL
KCHQIKAAHLSDHCACAGTFTCKEDVSDFRNKMQVFLNIAINQKFQLLQECTSWILEAR
NT seq 6660 nt   +upstreamnt  +downstreamnt
atgaacgccgctgaaaatagccggcgctgggaccggcgagatagcactaggttttcgaag
aagcagaagctcatactcaactccgaagaacagctcgaatctaagctcggtttcgatgtc
ttcaccgaaggcgataaacgactcggctggcttcttactctttcctcttcgtcatgggag
gatcaggagactcacaaagtgtacagttgtgttgatctttactttgtttgtcaggatggt
tcaacgttcaaagtgaagtacagattcaggccatatttttatgtggcaacaaaggataaa
atggaaatggatgttgactcatatctgagaaggcgatatgaatctaaaatcgcagatatt
gaagttttagagaaagaggatcttgatcttaaaaaccacctgtctggcctacacagatca
tatttaaagatatcatttgacactgttcaacaattgatggatgtgaagcgtgatctaaca
cacattgttgagagaaatcaatcaaagtttgatactatagaagcatatgaatctatactg
acggggaaaagcaagcagcgaagtcaagattttatagattatatcactgatctacgtgaa
tatgatgtcccctaccatgttcgcttttccattgacattgatgttagatgtggtcagtgg
tacgatgtcagtgtatctagctctggtgttatgttggagaagaggactgatctcttgcag
cgagctgaagttcatgtttgcgcatttgatattgaaactacaaagcttcctcttaaattt
cctgatgccgaatatgattccgtaatgatgatctcatacatggttgatggccatggctat
ctcatcattaacagagagtgtgttgcagaagatattgaggatatagagtataccccaaaa
ccagaatatgaagggcattttaaagtgacaaatgtaaaaaatgaggaaggactccttaga
cattggtttgcacacatgcaagtggtgaagcccggtatctatgtaacatataatggtgac
ttctttgattggccatttgtggagacaagagcagctcattatggtttgagtctgaaggat
gaacttgggttttcctgtgacaagaatcaaggggaatgtcgtgctaaatttgcttgccat
ctggactgttttgcttgggtcaaacgtgatagttatcttcctcaaggaagccaaggtctg
aaggctgttacgaaggccaagttgggttatgatcctctagaagttaatcctgaggatatg
gttcgctttgctaaggaaaaaccacagatgatggcttcgtattctgtttcagatgctgtt
tcaacttactacttgtatatgacttatgttcatcccttcattttctcccttgcaaccata
atacccatgcctccagatgaagtcttgcgcaaaggaagtggaacgttgtgtgaaatgctt
cttatggtccaggcttataaggcaaatgttatctgtccaaacaagcatcagtctgatcca
gagaagttttatgggagtcaactccttgagagcgagacatacattggtggtcatgtggaa
tgcctagaaagtggtgtattcagatctgacattccaaccagttttaaactcgatccctct
gcctatgagctattgatcaacaaccttgatagagatctgcagtatgctattatagttgag
gggaagatggacttggaatctgtcataaattatggtgaagtgaagaatgccatcatggaa
aagctaatgagtttacgagataatcctttaagggaagaatgccccctcatatatcatctt
gatgtagctgccatgtatccaaacatcatactgacaaataggcttcagccaccatcaata
gtttcagatgagatatgcactgcatgtgattttaatcgtcctggcaaaaagtgtctccgg
aagctggaatgggtttggcgtggtgaaatgtacatggcaaaaagaagtgattattaccac
ataaagaggcaactcgagtctgaacttgttgaagtaggagatggtcaacgatcaaagtct
tttcttgatttgcctaaagcagaacaacaagtaaagatcaaggaccgtttaaagaaatac
tgtcaaaaggcatataaaaaagttcttgaaaagccggtcacagaagttcgagaagcaggg
atctgcatgcgagaaaatcctttttatgttgataccgtacggagtttccgagataggagg
tatgaatacaaaggccttaataaagtttggaaaggtaagctgtctgaagcaaaggctagc
ggcaattccataaatattcaagaagcacaggatttggtagttctgtatgattcattgcag
ctggctcataaatgcattttaaactccttttatggttatgtcatgcgcaagggtgcaaga
tggtactcaatggagatggctggagttgttacatatactggtgcaaaaatcattcagaat
gctcgattgttggttgaaaaaattggaaaacccctcgagttagacacagatggtatttgg
tgtgcattaccaggctctttccctgagaattataccttcaagacaaaagatccaaagaag
aagctgacaatctcttatccttgtgtaatgctgaatgttgatgtggctagaaacaatacc
aatgatcagtaccagactctcaaggaccccatcaataagacgtatacaatacacagtgaa
tgctcaattgagtttgaagtggatggaccatataaggcaatgattcttcccgcttccaag
gaagaaggtattctaattaagaagcgctatgcagttttcaatgatgatggtacgcttgcc
gaacttaaaggttttgagattaaacgtagaggtgagctaaagctcatcaaagttttccag
gctgaactttttgacaagttcctccacggatcaaccttagaggaatgttattcagcagtt
gcttctgtggctgatcggtggcttgacctgcttgataatcaaggccaagatattgcagac
agtgagttgcttggatatatatctgaatcaagcacaatgagcaagtccctagctgattat
ggtgagcaaaagtcatgtgcagtaaccacagctaaaaggcttgctgattttctgggggat
gcaatggttaaagataaaggattgctttgtcaatatattgttgcatgtgagccaaaggga
accccagtaagcgaacgtgctattcctgttgcaatatttgaaactaatgctgagatcatg
aggttctatgtcaaaaagtggtgcaaaatatcatcagaagtcggaatacgctccattatt
gattggtcttattacaagcaacggcttagctcagcaatccaaaagattatcacaattcct
gctgcaatgcagaaggtttcaaaccctgtcccaagggtggttcatcctgattggctgcat
aagaaggttcgtgaaaaagaagacaaatttcgccaacgaaaattaaatgatatcttcagt
tcagtgaatagagatgacacagtggccagtacacattctaaaaatcagcaaaattgtgaa
gacctggaagactttagacagagtggtaaatcatctaaatctggtccaaggcctgtggtc
catcgtcatgcagtgaacaaagaacacccagtgcacactagtgatcaattggacagtcga
cagcaagatggtcatgcaagcagtccctccaagatgttaccttcacaagaaattgctgct
gtggaagatattgacaggaatgtagattatcatggatggctacagcaaaaaaagagaaaa
tggaaagagattcgtgaagaaaggaaacgccaaaggttggatacctcaaggacagtaaac
catgttaatggcagtgctgacatgcttcatagcatggtaaaccgcaaacgccctggtaaa
actggggttagttcctactttgagcgacacgaattagccctcacacgaagtcactggcag
atagttcagcttgaaccaacttcacaacatggccaattttttgcatgggtagttgtggaa
ggaatcatgcacaaaattccagtaactgttcccagagtgttttacctcaactccaaagct
cctataacagaggagtttcctggaagacgtgtcaacaagattcttcctcatggatgccat
agctacaatttaattgaggtcactattgatgaggatcaattcaagtcagaaagcaaaaag
ctagcagctcaccttgctgacccagaagtggagggaatatatgaaacgaaggttccatta
gagttcagcgctattcttcagatgggttgtgtgtgtaaagttgataaagcaactaagaaa
aggaatccacaagatggttggagtttgagtgagctgcatatgaagacaacagctgagtgc
ccgtatttggatcaatcaatagctttcttctatttatatcatagtgcgtcggatgtacga
gccatttacgtgggacattttcctgcatccaagatgatacatgttgtggttgttaatcca
tttcaaaacaaggaattatcaccacacattcttgaaagacatttttatgaaggttgccaa
acattgtctgggcagcccatcacacaaaaagacggtgttagtttcaaggtggattacgtc
gggtacatcaaggatgctgagaggattctaaagagaacaattaatgagaataggcatcat
ggacctgcggttgcgatgattgagtgtcctaatgcccatttgctgaagtctggcatacga
gctttggaggattttccttgcatcagtatcccttgtaatgctcgggatagccaatatcag
gcactaggttggcaaaatgtagcagcaaagattggaatgcagcgatgtgcaacatcctcc
cggtggctaaatgaaaggatcactctctcaagatatgcccatgttccgatagggaatttt
gatgttgattggctcatgcatactgcagacatcttcttttctagagcacttcgtgatcag
caacaggtcttgtggatatctgataatggcatccctgacttaggaggcgtaaatgatgaa
gtatcatcttttatggatgaggtcaatcaaccggttcttatttacccgggtgcatataga
aaagttactgttgagctgaagattcatcatctgtctgtcgatgctctactgaaaagcaac
caagtaaatgaaatggaaggaggcactctgtttggattggaccaggaagtgaaccctacg
acggattttactaatgaacagtacttctctgatgcaacaacttcctgtgcacctgcattt
cgtgtactcaagcagttgattcaaaggtgcattacagatgcagtaacatcaggaaacata
tttgctgatgcaatgctgcaacatttgtaccgatggctctgcagccctcgatctagactg
catgacccagctctttacagtatgctacacaaggttatgcaaaagatgtttgcattactt
gtggctgaactccgaaaattgggtgctggtattgtgtttgccagcttctcgaaaattata
atcgacactgggaagtcagatatatctgctgccaaagcctactgtgataatgttattaaa
aatgtacaaacaagagaattgtttgagtggattgaacttgagcccttgcagttttggcac
tcattgcttttcatggatcagtacaattatggcggaattcaagctaaacatagtgatgga
cctgtagaagttaactcagaatcaggtgaagaaagtgtgtgtggtgaatctcaagtagat
attgtgtcaagctggaacattgcagaaaatttacctaaggcaactcaggatcacttcatt
ttgattgtttcggagtttatgtatattccatggaaatatgcgcaagaacatgctgcactt
cgagcatcttctagtgatggtgatttctgtacaccatcaatcactgctgcacttgctgaa
acatttgatttgcaaatggcagacgatctaaagaagaagatccgaacttacttcactgac
aaacttctgaaaattgtttgtgaccctaatcttcaaatgaaagtactgaacaactctcag
aagaaccaggagacaccagatgcaaattcacagccttatagccatgtcgagaagggggat
ccagctttagagttcattaagcatgtctctgcagttttggcccttgaccagaacgtgcag
cacgaagttctgatcatgaggagaaatctattaaaacttgttcgtgtgagggaattcgct
ccggaggcagaatttcgtagtctctctgtatcatatacccttccaaatgtcatttgcagt
tactgcaatgactgtcgagaccttgacttgtgtcgagacagagcgttgatttctcacgag
tggcgttgtattgtgccccagtgtgggcaaccttatgatcgtgaagcaatggaaaatgct
cttgttcaaattgtgcggcagagagagagactataccatcttcaggatctgatatgccta
aaatgccaccagattaaagctgcacatttatcagaccactgtgcttgtgccggaacattt
acctgcaaggaagatgtctcagatttccgcaataaaatgcaagtcttcttgaacatagcc
ataaatcaaaagtttcaattgctccaagaatgcacttcttggattttggaagccagataa

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