Capsicum annuum (peppers): 107847566
Help
Entry
107847566 CDS
T04646
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cann04131
]
107847566
Membrane trafficking [BR:
cann04131
]
Protein recycling
Others
EARP complex
107847566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
107847566
NCBI-ProteinID:
XP_016547389
LinkDB
All DBs
Position
11:complement(231091130..231119930)
Genome browser
AA seq
1100 aa
AA seq
DB search
MQSNSSSDSSSSPFGLIPLYLFNGGQQLSLSESGGFELSRLLFLGSLLFSNQGRRDDDED
VMDLSKVGEKILSSVRSARSLGLLLPSSDDRRPEVPERVAAAAALARVLAGIPPHQRYTL
SSSSEELSSIYGSKPPGQVVEELEEEFYEEEFDPVGHILEHIPSEESELAYLEDQATLRL
SQLDRISERLSRHVMEHHEVMVKGMDLVRQLERDLKVANVICMNGRRHLTSSRNEVSRDL
IVSNNSKRKQALLNVLPVLTELCHALDMQSTLETLVEEGRFSKAFQVLSEYLQLLDTLSE
LLAAQEMSRGVEVWLGKTLQKLDSLLLGVCQDFKEENYLTVVDAYALIGDVTGLAEKIQS
FFMQEVLSETHSALKTTVQEDLDNSNVQTSRLTYSDLCTQIPESKFRECLLATLAVLFRL
MCSYHAIQSFQPEDKEDTSPSTERALTLSSVEDLPTTSVASSDTAIYGPSNINDRVEEAR
DDGSTASSSGSPWFQLRKDATTFVSHTLLRGRKNLWQLTTSRAAVLLSSPAIHSASIHQF
LITYEDLNIFVLAGEAFCGSEAVEFRQKVKSVCESYLAAFHRQNIYALKMVLEKENWLIL
PPETIEVVSFAGLVGDGAALIVTSETSPNARPLQVSKSVHPIQTDSSKRNGFSSWLKGGN
PFMPKLNGSSRVYMESFLPNGSAMQESGNSNEDSLRNSDVNHVNGNTNLSEDENEDLHAD
FIDEDSQLPSRISKPGHSRSRSSHWSNDQIKEQTGSSLSLLRSLDKYARLMQKLEIVNVE
LFKGFCQLFGIFFHFVFEIFGQHGVHPNGKAVTDALSYRLKTALSRITQDCDQWMKPQSQ
SFSSSSPSSSSFSHMDVMPTSPPSHLNGASLGLKERCAGADTMYVVARLLHRSKAHLQSM
LRNNAALVEDFYVHSVDAVPDLVDHIHKTTARLLLHINGYVDRIANAKWEVKELGVEHNG
YVDLLLGEFKHYKTRLAHGGIRKEVQDLLLEYGVDNVAEILVEGLSRVKRCTDEGRALMS
LDLQVLINGLKHFISVDVRPKLQIVETFIKAYYLPETEFVHWARAHPEYSKSQIVGLINL
VSTMKGWKRKTRLEVLEKVE
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaattcgtcatctgattcatcatcatcaccatttggtttaattccactatat
ttattcaatggaggtcaacaattaagcctaagtgaaagtggtggatttgaattatctagg
ttattgtttttgggttcattgttgttttccaatcaaggtagacgcgacgacgacgaagac
gttatggacttgtctaaagttggtgagaagattttgagttctgttcgttcggctaggtct
cttggtcttctgcttccttcttctgatgatcgtcgtcccgaggttcctgaacgagttgct
gccgctgctgcacttgcacgtgttctagctggaatacctcctcatcagagatacactctg
tcatcaagctcagaggaactgagctcaatatatgggagcaaacctcctggtcaagttgtc
gaggaactggaggaagaattctatgaagaggaatttgatcccgtcggacacattctggag
catattccatccgaagagagtgaactagcttacttggaagatcaggccactcttagatta
tcacagctggacagaatttctgaacgcttgtcacgccatgttatggagcatcatgaagta
atggtgaagggaatggatcttgtaagacaactagaaagagacttgaaggttgcgaatgtc
atttgcatgaacggtcggcggcatttaacctcttcaaggaatgaggtgtcaagggatctc
attgtctccaacaattctaaaagaaaacaagcgttattgaatgtgcttcctgtcctgact
gaactgtgccatgcactagacatgcaatcaacacttgaaactcttgttgaggaaggaaga
ttctcaaaggcatttcaagtactatcagaatatttacaacttttggacacactttcggag
cttttggctgcacaagagatgagccgtggtgttgaggtttggttagggaagactcttcaa
aagctggattcccttctattaggagtgtgccaggatttcaaagaggagaattatttaact
gtagttgacgcttatgcactaattggagatgtcactggccttgctgagaagatacaaagt
ttctttatgcaggaggttctatctgaaacccactctgcattgaagactaccgtacaagag
gatctggataacagcaatgtgcaaacttctaggctcacatatagtgatctgtgcacccag
atacctgaatccaagttcagggaatgcttgctagcaacactggctgtactttttaggttg
atgtgttcatatcatgcaatacagagcttccagcccgaggataaggaagatacttcacca
agcacagagagagcattaactttatcctctgttgaagacctgccaactacttctgttgct
tcatcggacactgccatatacggtccatccaatataaatgatagggttgaagaggcaagg
gatgatggaagtacagcgtcaagcagtggatccccttggtttcagctgaggaaagatgct
acgacctttgtttcacatacattacttagaggtcgaaagaatctttggcaacttacgaca
agtcgtgcagctgtcttgctttcttcaccggctattcattcagctagcatccatcaattc
ttaataacttatgaagatttaaacatttttgtactggctggagaagccttttgtggaagt
gaagcagttgagttcaggcagaaagtgaaatctgtttgtgaaagctatttagctgctttc
catcggcaaaatatatatgctcttaagatggtgctggaaaaggagaattggctgatattg
ccaccggagacaatagaagtagtaagcttcgcagggcttgtcggtgatggagcagccttg
atagttacatctgagacctctccgaatgctcgaccgctgcaagtaagtaagtctgtacat
cctatccagactgactcctctaagaggaatggattttcaagttggcttaagggtggaaat
ccatttatgccaaaactaaatggtagttcgagggtgtacatggaatcttttttgcctaat
ggatctgcaatgcaagaaagtggaaactccaatgaagattctttgagaaacagtgatgta
aatcatgtcaatgggaatactaatttatcggaagatgaaaatgaagatcttcatgctgat
tttattgatgaagatagccaactacctagccggatttctaaacctggtcattcaagaagc
cgttcttcacattggagcaatgaccaaataaaagagcaaacaggatcatcacttagcctc
ctgaggtcattggataaatatgcgaggctgatgcagaagttggagattgttaatgttgag
ctttttaagggattttgccaattgtttggaatcttctttcacttcgtatttgagatcttc
ggtcagcacggtgttcatcctaatgggaaggccgtgactgacgctttgtcttataggctg
aagactgcattatcacgaataacacaagattgtgatcagtggatgaaaccccagtctcag
tcattttcttcctcttctccctcaagctcatcattttcgcacatggatgtcatgcctacc
agcccaccaagtcacttaaatggtgcttctctgggactgaaggaaagatgtgcaggggct
gacactatgtatgttgttgctcggttattgcatagatctaaagcacatcttcagtcaatg
cttcgaaataatgctgcactggttgaggatttctatgtgcattcggtggatgctgtaccg
gaccttgtagatcatattcataaaacgactgctaggttacttctccacataaatgggtat
gttgatcggattgccaatgctaaatgggaggtgaaggagcttggagtagagcacaatgga
tatgtggatcttttgcttggagaatttaagcattataaaacaaggcttgctcatggagga
attcggaaggaggtccaagatctcctcttagaatatggagttgataatgttgctgaaatt
ctcgttgaaggactttctcgggtaaagaggtgtactgatgaaggacgagctcttatgtca
ttagatcttcaggtattaataaacggcttgaagcatttcatttctgtagacgtgagacct
aaactacagatagttgaaacattcatcaaggcctactatcttccagaaaccgagtttgtc
cactgggcccgtgctcatccggaatacagtaaaagtcagattgttggcctgatcaaccta
gtctctacaatgaaaggctggaagaggaaaaccaggttggaagtgttggaaaaggtcgag
tga
DBGET
integrated database retrieval system
