Capsicum annuum (peppers): 107847567
Help
Entry
107847567 CDS
T04646
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cann
Capsicum annuum (peppers)
Pathway
cann04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107847567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107847567
03009 Ribosome biogenesis [BR:
cann03009
]
107847567
04131 Membrane trafficking [BR:
cann04131
]
107847567
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cann04147
]
107847567
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107847567
Ribosome biogenesis [BR:
cann03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107847567
Membrane trafficking [BR:
cann04131
]
SNARE
SNARE associated proteins
Others
107847567
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107847567
Exosome [BR:
cann04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107847567
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_14
AAA_22
TIP49
NPHP3_N
AAA_17
RNA_helicase
nSTAND3
AAA_18
AAA_28
Mg_chelatase
Parvo_NS1
ATPase_2
Viral_helicase1
nSTAND_NTPase5
ABC_tran
NB-ARC
Vps4_C
AAA_7
NACHT
TsaE
IstB_IS21
DUF815
Zeta_toxin
AAA_24
AAA_lid_PRS2_C
Zot
Motif
Other DBs
NCBI-GeneID:
107847567
NCBI-ProteinID:
NP_001311572
UniProt:
Q96372
LinkDB
All DBs
Position
11:complement(234123432..>234128398)
Genome browser
AA seq
805 aa
AA seq
DB search
MTDQAESSDSKNAKKDFSTAILERKKAANRLVVDEAVNDDNSVVALHPATMEKLQLFRGD
TILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGLTGDLFDAFLKPYFLEAYRPLRKGDNFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVLDLEDDTIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIEKDIEREKRRQEN
PDSMDEDVDEVPEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFADT
SGGATAAADPFATSNAAADDDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccaagcggagtcatccgactcaaaaaatgcgaagaaggatttttcgacggcg
attttggaaaggaagaaagcggcgaataggcttgttgtagatgaggcggttaatgatgat
aactctgttgttgctttgcatcctgctaccatggagaaacttcagctttttcgtggagat
acaattcttattaagggaaagaagagaaaggatacagttgtcattgcccttgctgatgaa
acatgtgatgagccaaagattaggatgaacaaggtggtccgttcaaatttgagggttcgt
ctaggagatgttgtatctgtccaccagtgtccagatgtcaagtatgggaagcgtgtgcac
atacttcctatagatgatacaatagaaggcctcacaggggatctgtttgatgcattcctg
aaaccttactttttggaggcatatcgtccattgaggaaaggggacaattttcttgttaga
ggagggatgagaagtgtggaattcaaggtcatagaaaccgaccctggggagtattgtgtt
gttgctccagacactgaaatcttttgtgagggtgagcctgtgaaaagagaggatgaggag
agacttgatgaggtaggctatgatgatgtgggtggtgtgagaaagcagatggctcagatt
cgtgaactggtggaattaccgttgaggcatcctcaacttttcaaatctattggtgtgaaa
ccaccaaaggggattttactttatggcccccctggttctggaaagactttgatagccaga
gctgttgctaatgaaacaggtgcatttttcttttgcattaatggacctgaaatcatgtcc
aaattagctggagagagtgaaagtaatctcagaaaggcatttgaagaggctgaaaagaat
gctccttctatcatatttattgatgaaattgattcaattgctcccaagcgagagaaaaca
catggtgaagttgaaaggaggatcgtctcacaactcttgactctgatggatggactgaaa
tctcgcgctcatgtaatagtgatgggagctaccaaccgtccaaacagcattgaccctgct
ctgagaaggtttggtaggtttgatagagaaatagacattggtgttccagacgaagttgga
cgccttgaggttcttggtattcataccaagaatatgaagcttgcggaagaagtcgatttg
gaaagaatttcaaaagatacacatggatacgttggtgcagatcttgccgctctctgcacg
gaagctgcacttcagtgcattagggagaaaatggatgtacttgatctggaagatgacact
attgatgctgaggtgttgaactcaatggctgtaacaaatgagcacttccaaactgctctc
ggtacaagcaatccgtctgcattgcgtgaaacagtggttgaagtgcctaatgtttcatgg
gaagacattggaggccttgaaaatgtcaaacgagagcttcaagagactgttcaatatcca
gtggaacccccagagaagtttgagaagtttggtatgtcaccttcgaaaggtgtacttttc
tatggtcccccaggatgtgggaaaactctacttgccaaggcaattgcaaatgaatgtcaa
gccaatttcatcagtgtcaaaggacctgaactgctcaccatgtggtttggagagagtgag
gcgaatgttcgtgaaattttcgataaagcgagacaatccgctccctgcgtcctcttcttt
gatgagctcgactctattgctactcagagaggaagcagcagtggagatgctggaggagca
gctgatcgggttctgaaccaacttttgactgaaatggatggcatgaatgcaaagaagact
gtttttattattggggccacaaacagacctgatataattgaccctgcacttctgcgtcct
ggccgtcttgatcagttaatttatattcctctaccagatgaggattcacgccatcagatt
ttcaaggcatgcctcagaaaatcccccttatcaaaggatattgatttgagagctctcgcc
aaacatactcagggatttagtggggctgatgtcactgagatttgtcaacgagcctgcaaa
tatgccattagggagaacatagagaaagacatagaaagggagaagagaagacaggaaaac
cctgattcaatggatgaagatgtcgatgaagtaccagagatcaagcccgctcatttcgag
gaatctatgaagtatgcacgacgtagtgtcagtgatgctgatatacgcaaataccaggca
tttgctcagacattacagcagtccagaggtttcggaacagaatttcggtttgcagatact
agtggcggtgcgactgctgcagctgacccatttgcaacttctaatgctgcagccgatgac
gatgacctatatagctga
DBGET
integrated database retrieval system
