Capsicum annuum (peppers): 107847664
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Entry
107847664 CDS
T04646
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107847664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cann03009
]
107847664
Ribosome biogenesis [BR:
cann03009
]
Eukaryotic type
Pre-60S particles
GTPases
107847664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
GTP_EFTU_D2
EF-G_D2
EFG_III
SRPRB
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
107847664
NCBI-ProteinID:
XP_016547541
LinkDB
All DBs
Position
11:complement(226019544..226023655)
Genome browser
AA seq
1023 aa
AA seq
DB search
MGNSDVEKIRNICILAHVDHGKTTLADHLIAASGGGVLHPKQAGKLRFMDYLDEEQRRAI
TMKSSSIGLEYKEHSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWIEKLTPCLVLNKIDRLIVELRLTPLEAYTRLQRIVHEVNSIVSAYKSEKYLSDVDSL
LSAPSGLVEGEYPDPEFIEEDEEDTFQPQKGNVTFVCALDGWGFSISDFAEFYASKLGAS
SAALQKALWGPRYFNAKTKMIVGKKGISSGSKARPMFVQFVLEPLWQVYQAAVEDDGDRG
MLEKVIKSFNLSIPPRELQNKDPKSVLQSVMSRWLPLSDTILSMVVKYMPDPVSAQTFRI
SRLLPKRELLDIGADPNVLSEAELFRKSVESCDSSPDAPCVVFVSKMFAIPSKMLSRGEI
MDDNGNGDSDECFLAFARIFSGVLHAGQKVFVLSALYDPLKEESQQKHVQEAELQSLYMM
MGQGLKPVASAKAGNVIAIRGLAQYILKSATLSSTLNCWPLSSMIFQVSPMLKVAIEPSD
PADMGALIKGLRLLNRADPFVEVSVSARGEHVLSAAGEVHLERCIKDLKERFAKINLEVS
APLVSFKETIEGDSANPLENLKLLSRSSDYLEKETPNGRCVVRVRVMKLPTALTKLLDES
SELLGDIIGGKSLQDCKSSETLRGSIVEDENPIEALKKRLIDAVERDFSTGFDETEKDRI
EKCKKMWQKFLRRIWALGPRQVGPNILLTPDVKGKSDDTSVLVKGSPYVSEKLGFTGDND
DRSASPESSTRVDQTLLREAENLESSILSGFQLATASGPLCDEPMWGLAFVIEAFISPLA
TQPNDSDTPIPQPEQYGLFPGQVMNVVKEACRAAVLQRKPRIVEAMYFCELNTPHDQLGN
TYTVLNRRRAHVVNEEMQEGSSLFTVHAYVPVAESFGFSDELRRKTSGAASALLVLSHWE
ALPEDPFFVPRTEEEKEEFGDGASVPQSVARKLVDSVRRRKGLPVEEKVVQFATKQRTLA
RKV
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggggaattctgatgttgaaaagattcggaacatatgtatacttgctcatgtggatcat
gggaagacaacattggctgaccatttgattgctgcatctggtggtggtgtgcttcacccg
aagcaagcgggtaaacttaggtttatggattatttagatgaggagcagaggcgagcgata
actatgaagagttcgtctattggtcttgagtataaggaacattcgattaatcttatagac
tctcctggtcacatggatttttgtagtgaagtttcaactgcagcgcgtttgagtgatggg
gcgttggtgttagtggatgctgtagagggtgttcacattcagacgcatgctgttttgcgt
caggcgtggattgagaagcttacaccgtgtttggttttgaataagattgatagattgatt
gttgaattgagattgactccgctggaggcgtatactcgcttgcagaggattgttcatgag
gtgaatagtatagtgagtgcctacaagtctgaaaagtacttgtcggacgttgattctctg
ttgtctgccccgtcgggacttgtggaaggtgaatatccagatccagagttcatagaggag
gacgaagaggatactttccaaccccagaaggggaatgtcacgtttgtgtgtgcattagat
ggatggggcttcagtattagtgattttgccgagttttatgcttcaaaactgggtgcaagt
tcggctgccttgcagaaggcattatggggacctcggtattttaatgccaagactaagatg
attgtaggtaagaagggaattagtagtggaagtaaggccagacccatgtttgtgcaattt
gttcttgagccactttggcaggtttatcaagctgccgtggaagatgatggagaccggggg
atgcttgagaaagttataaagtctttcaatttgtctatacctccacgcgaacttcaaaac
aaggatccgaaatctgtgcttcaatctgttatgagtcgttggcttccattgtcagataca
attttgtctatggttgtcaaatatatgcctgatcctgtatctgctcagactttccgtata
tctcggctgcttccaaagagagaactcttggatataggtgccgaccccaatgtgctttcc
gaagccgaacttttcaggaaatctgtggagtcctgtgattctagccctgatgcaccttgt
gttgttttcgtttctaagatgtttgctattccatcaaaaatgctttcgcgtggagagatt
atggatgacaacggaaatggtgactctgatgaatgtttccttgcgtttgcccggatcttt
agtggggttcttcatgctggacagaaagtttttgtgctttctgcgttatatgatccacta
aaggaagaatcacagcagaagcatgtgcaagaagctgaattgcagtccttgtatatgatg
atgggtcaagggttgaaaccagtggcgtcagcgaaggctggtaatgtcatagctatccga
ggacttgcccagtatatattgaagagtgcgactctttcatctacgttaaattgttggcct
ttatcaagtatgattttccaagtttcacccatgcttaaagttgcaattgaaccgtctgat
cctgctgacatgggtgcacttattaaaggtttgaggcttctaaacagggcggaccctttc
gttgaggtttctgtttctgccaggggcgaacatgttctttctgcagctggtgaggtgcac
ctagagagatgcattaaagatttaaaggagagatttgcaaagataaacttggaagtctct
gctccgcttgtatctttcaaagagaccatcgaaggagatagtgctaatcccttagaaaat
ttgaagctattgagccgcagctctgattatttggagaaagaaacgccaaatggaagatgt
gttgttagagtgcgtgttatgaaacttccaactgcattgacgaagctgcttgatgaaagt
tcggagttgcttggagacatcattggaggtaaatctttgcaggattgtaaaagctcggaa
actctcagaggtagcatcgtagaagatgagaatccaattgaagcactcaagaaacgcctg
atagatgctgtggagcgcgacttttctactggatttgatgagacggaaaaggataggatt
gagaaatgtaagaaaatgtggcaaaaattcttaaggaggatctgggctttggggcctagg
caggtcggtcccaacattctcctcaccccagacgtgaaagggaagagcgatgatacttct
gttcttgtaaagggttccccttatgtatctgaaaaattgggctttacaggtgacaatgat
gaccgcagtgcatcaccagaatcatcaactagggtagatcagacccttctacgagaagct
gagaatctcgaaagcagtatattatctggattccagttggctacagcatctggccctttg
tgtgatgaaccgatgtggggtttggcgtttgttattgaagctttcatatctccattagct
actcaaccaaatgatagtgacacacctattccacagccagaacaatatggactcttccct
ggacaggttatgaatgtcgttaaggaggcctgcagggctgctgttctccaaagaaaacct
cgcattgtggaagccatgtacttttgtgagctgaacaccccacacgaccagttgggcaac
acttatacagttcttaatcgcaggcgtgcccatgtagtaaacgaagaaatgcaggaaggt
tcttcgttgttcactgtgcatgcttatgtgccagttgcagaaagctttggattctccgac
gagttgaggagaaagacttctggagctgcaagtgcattactcgttcttagccactgggaa
gcccttccagaggatcctttctttgtacctagaaccgaggaggagaaagaagaatttgga
gatggtgccagtgtaccgcagagtgtagcaagaaaactcgtggattctgtgagacgaagg
aaaggtcttccggtagaggaaaaagtagtacaattcgcgactaagcagaggactttggct
cgcaaggtgtag
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