Capsicum annuum (peppers): 107847838
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Entry
107847838 CDS
T04646
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cann04131
]
107847838
Membrane trafficking [BR:
cann04131
]
Protein recycling
Others
EARP complex
107847838
Endosome - Golgi transport
Tethering complex
GARP complex
107847838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
Vps54_N
COG7
RINT1_TIP1
HemX
COG5_N
DUF401
MPH2
XhlA
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
107847838
NCBI-ProteinID:
XP_016547865
LinkDB
All DBs
Position
1:complement(215807952..215867302)
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AA seq
824 aa
AA seq
DB search
MEKQNTLDYINQMFPTEASLSGVEPLMQKIHSEIRRVDAEILTAVRQQSNSGTKAREDLA
AATSAVQELMNKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRHYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKSIKQVLKSHVFSD
FSSLGTGKETEESNLLQQLSDASLVVDALEPSVREELVKIFCNRELTSYQQIFEGAELAK
LDKTERRYAWIKRRLRTNEEIWKIFPRSWHVDYLLCIQFCKLTRSQLVEILVSMKEKPDV
ATLLTALQRTLEFEEELAEKFGGGTRSKDAVDDNEETEMSGNKSQTVSDIRKKYEKKLAA
HDGSQHEELHGEKDASVPGAGFNFRGIISSCFEPHLSVYIELEEKTLMDSLEKEMLEETW
EIEEGSQTNILSSSIKVFVIIRRSLKRCSALTRNQTLFNLFKVFQKVLKAYATKLFARLP
KGGTGIVAAATGIEGQIKTSDKDERVICYIVNTAEYCHKTCGELADNVSKLIDAQFVDGV
DMSEVQDEFSAVITKSLITLVHGIETKFDSEMAAMSRVPWSTLESVGDQSDYVNGINLIL
TSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYHNIFKCKQLSETGAQQMLLDTQAVKTIL
LEIPSLGKQTAGAASYSKFVSREMSKAEALLKVILSPIDSVADTYCALLPEGTLTEFQRL
LELKGLKKADQQSILDDFNKRGSGISQPTIMASSVVTSTPNTSIAPTITNAASSPGAIIS
REDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcagaatacgttggattacatcaaccagatgtttcccacagaagcatctcta
tctggcgttgagccccttatgcagaagatacatagtgaaattcgtcgtgttgatgctgaa
atattgactgctgttcggcaacagagtaactctgggaccaaagccagagaagatcttgct
gcagctacgagtgctgtgcaggaactcatgaataagattcgagaaattaaaaccaaagca
gagcaaagtgaaacaatggttcaagaaatatgtcgcgatattaagaaattggattttgca
aagaagcacataacaacaacaattactgcccttcaccgcctaaccatgctagtctctgca
gtagagcaacttcaagtaatggcttccaaacgtcactataaagaggcagctgcacagctt
gaggctgtaaaccagctctgtagtcattttgaagcctatagggatattcctaagataaca
gaacttagagaaaagtttaagagcatcaaacaagtcctcaagtcacacgtgttctctgac
ttctccagtttaggcacagggaaggagacagaagaaagtaatctattacagcagttatca
gacgcgtccttagttgttgacgctctcgagccttctgttagagaagagttggtgaaaatt
ttttgtaatagagaactcacctcgtaccagcagatatttgaaggagcagaactagctaag
ttggacaaaactgaaaggagatatgcttggatcaagcgtcggctaagaacaaatgaggag
atttggaaaattttcccccgttcgtggcacgtcgattatttgctttgcattcagttctgc
aagttgacaaggtctcaacttgtggaaatccttgttagcatgaaagaaaagccagatgta
gcaaccttgttgacagctctgcagcgcactttggaatttgaagaggagttagcagagaaa
tttggtggtggaacccgcagtaaagatgctgtagatgacaatgaagaaacagaaatgagt
ggaaacaagagtcagacagtttcagacattcggaaaaagtatgagaaaaagcttgctgcc
catgatggtagtcaacatgaagaactacatggagaaaaagatgcatcagtcccaggagct
ggtttcaatttccgaggcatcatctcttcatgctttgaacctcacttgtcagtttatata
gagctggaagagaaaactcttatggacagtttggagaaagaaatgctggaagagacatgg
gaaattgaggagggaagtcagactaatattttgtctagcagcattaaggtctttgtaatc
atcaggaggagcttgaagcgatgcagtgctttgacgagaaaccagacactgtttaatctc
tttaaggtatttcaaaaagttcttaaggcttatgctacaaagctcttcgctagattgcca
aagggtggtacaggaattgttgcagctgccactggaatcgaaggacagataaagacttcg
gacaaggatgaaagggttatctgctacatagtaaatactgcagagtattgtcacaaaacg
tgcggagaattggctgataatgtgtcaaaactgattgatgctcaatttgtggatggagtg
gatatgtctgaagtacaggatgaattttcagcagttattacaaaatcattgattacatta
gtgcatggaatcgaaacaaagtttgactctgaaatggcggcgatgagtcgggttccatgg
agtactcttgaaagtgttggtgatcagtcagactacgtgaacggcataaatttgatcctt
acgagtagcattccagtgctcggaagtcttctctctcccatttatttccaattcttcctg
gataagcttgcgtcatctcttggtccacggttctatcataacatcttcaaatgcaaacag
ctatcagagactggagcacagcaaatgcttttggatacacaagcagtaaagactattttg
ctggaaattccttctctgggtaaacaaacagcaggagctgctagctactcaaaatttgtg
agtcgtgagatgagcaaagcagaagcattattgaaggtcatactgtctccaatagattct
gtggcggatacatactgtgcgctgcttccagagggaacgctcacagagtttcagcgtctt
ttagagcttaagggcctgaaaaaagctgatcagcagagcatactggatgacttcaacaaa
cgtgggtcaggcatctctcagcctaccattatggcctcttcagttgtaacatctactcca
aacacctcaatagcaccgaccataactaatgcagcatcatcacctggggctatcatttca
agagaagatgtgctgaccagagcagctgctcttggaagaggtgcagctacaacaggcttt
aagagattcctcgctttaacagaagctgcaaaagatcggaaggacgggccattcaggaag
ttattcaatggatga
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