Capsicum annuum (peppers): 107848113
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Entry
107848113 CDS
T04646
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
cann
Capsicum annuum (peppers)
Pathway
cann04144
Endocytosis
cann04517
IgSF CAM signaling
cann05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107848113
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107848113
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107848113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cann04131
]
107848113
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cann04812
]
107848113
Membrane trafficking [BR:
cann04131
]
Others
Actin-binding proteins
Arp2/3 complex
107848113
Cytoskeleton proteins [BR:
cann04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
107848113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
EIF3I
WD40_Gbeta
Tricorn_2nd
Beta-prop_HPS5
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
RMC1_N
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
eIF2A
WD40_MABP1-WDR62_2nd
PEP5_VPS11_N
B-prop_COPA_B_2nd
Phage_HCP1
Motif
Other DBs
NCBI-GeneID:
107848113
NCBI-ProteinID:
XP_047254683
LinkDB
All DBs
Position
11:complement(<37174761..37185020)
Genome browser
AA seq
374 aa
AA seq
DB search
MAASSVHKFAQCITCHAWSPDLSMIALCPNNSEVHIYKLSEDKWEKVHVLQKHDQIVSGI
DWSYRSNKIVTVSHDRNSYVWNQETTGWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTSIAWHPNNVLLATTSTDGKCRVFSTFIKGVDA
KDSAMGSSADTKFGEQIVQLDLCFCWAFGVRWSPSGNTLAYVGHNSMIYFVDEVGPSAAA
QSVAIRDLPLRDILFLSERMVVGVGFDCNPMVFVADDSGLWSFLRFLDERKAVSSSAKYG
SQFSEAFGKFYGQSKLSASNNVEQSRGAHDNCINCILPLAKQRKSSVTRFSTSGLDGKIV
TWDLQNQEDLLDYL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaagttcagtacataaatttgctcagtgcattacttgtcatgcttggagtcct
gacctatccatgattgcactttgtcctaacaacagcgaagtacatatttataaactatcc
gaagacaagtgggagaaggtccatgttcttcaaaagcatgaccaaattgtttctggtata
gattggagttacagatccaacaaaatagtcactgtttctcatgaccgtaattcatatgtg
tggaaccaagaaacaacagggtgggttcctactctggttattctcaggctgaatcgtgca
gcactttgtgtgcagtggagtccaaaagaaaacaagtttgctgttggaagtggagctaaa
actgtttgtatatgctactacgagcaagaaaataactggtgggtgagtaagcttatcagg
aaaaggcatgattcatctgtaacaagtattgcctggcatccgaataatgttctcctagca
acaacatccactgatggtaaatgtcgagtattttcaacattcattaaaggcgttgacgca
aaagactctgcaatggggagttctgcagataccaaatttggagagcaaattgtccagctt
gatctctgcttctgctgggcttttggtgtcagatggtcccctagtggcaacaccttagca
tatgtaggtcataactcaatgatatacttcgttgatgaagttggtccctctgctgcagca
caaagtgtagcaatccgagatttgcctcttcgtgatatattgtttctttctgaaaggatg
gttgttggagtgggatttgattgcaatccgatggtctttgtggcagatgatagtggactc
tggagtttcttgagattccttgatgaacggaaagcagtgtcttcaagtgccaaatatgga
tcacagttttcggaagcatttgggaaattctatggtcaatcaaagttatcagccagcaac
aacgttgagcagtcaagaggcgctcatgacaactgtatcaattgcatattgccacttgcc
aaacagagaaaatctagtgtcacccgtttcagcacttcaggacttgacggaaagatagtg
acatgggatctgcagaaccaagaagatttattggactatctatga
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