Capsicum annuum (peppers): 107848183
Help
Entry
107848183 CDS
T04646
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00040
Pentose and glucuronate interconversions
cann01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107848183
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107848183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107848183
NCBI-ProteinID:
XP_016548373
LinkDB
All DBs
Position
11:complement(80753738..80756584)
Genome browser
AA seq
400 aa
AA seq
DB search
MGMSLSFLLLTLLAPICTFSSPVPDPEVIVHEVNQKINASRRNLGYLSCGTGNPIDDCWR
CDPNWEKKRQRLADCAIGFGKQAIGGRDGKIYIVTDTSDDPVNPKPGTLRYGAIQDEPLW
IIFDRDMFIKLKEELMLNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCQQGG
NAYVRDSPEHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIRGSTAITISNNY
LTHHNKVMLLGHSDTFTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY
AIGGSASPTINSQGNRFLAPNDVFNKEVTKHEDAPENEWKNWNWRSEGDLMLNGAFFTRS
GAGASSSYAKSSSLSARPSSLVNSITMNAGALGCKKGKRC
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgtcactttcttttcttctcctaactttattagctcctatctgcacattttcc
tcccctgttcctgaccctgaagttatagtccacgaagttaatcagaaaatcaatgcgtca
agaaggaacttaggctatttatcatgtggaactggcaatcccattgatgattgttggaga
tgtgaccccaattgggaaaagaaaaggcaaagattagctgattgtgccattggttttggc
aaacaagccattggtggaagagatggcaaaatctacatagttactgacactagtgatgat
ccagtgaacccaaagccaggaactttaagatatggtgcaattcaagatgaacccctttgg
atcatatttgatagagacatgttcattaagttaaaagaagagttaatgttgaattcattc
aaaactattgatggtagaggggctagtgtacatattgccggtggcccatgtattactata
caatatgttacaaatattattatacatggattgaatattcatgattgtcagcaaggtggg
aatgcttatgttagagactcaccagaacattatggttggaggacattatcagatggagat
ggggtttctatatttggtggaagccatgtttgggtggatcattgttccttgtcaaattgt
agggatggactgattgatgcaatccgtggatcgacagccataactatttccaataattac
ttgacacaccataataaggtaatgcttttgggacatagtgataccttcaccagagacaag
aacatgcaagttaccattgcttttaaccattttggagaagggcttgtgcagaggatgcca
agatgtagacatggatatttccatgttgtgaataatgactacactcattgggagatgtat
gcgattggtggaagtgcttctcctactatcaacagccaaggcaatagatttcttgctcct
aatgatgtcttcaacaaggaggtgacaaaacatgaggatgcaccagaaaatgaatggaag
aattggaattggagatctgaaggagatttaatgcttaatggagcttttttcacaagatct
ggtgctggagcttcttctagttatgccaaatcttcaagtttaagtgcaaggccatctagt
ttggttaattctattacaatgaatgctggtgcacttggttgcaaaaagggcaaaagatgc
tga
DBGET
integrated database retrieval system
