KEGG   Capsicum annuum (peppers): 107848274
Entry
107848274         CDS       T04646                                 
Name
(RefSeq) DNA repair protein RAD5A
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
cann  Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:cann00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cann03400]
    107848274
DNA repair and recombination proteins [BR:cann03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    107848274
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 107848274
NCBI-ProteinID: XP_047255854
LinkDB
Position
11:complement(230924803..230935442)
AA seq 1128 aa
MAAKKITDELVSMVRTIVGDEYREMDIIRSLHMAKNDPTAAINIIFDTPSFKKIEIRNTR
LNSDGGNASSNSGKIQESEISRVCSNEGLDSKSRIESEFGDNGLVGNGIQCDSESEFEGK
RGEGDMGSECWGSRVVGKRGGDEFGGSGLLGERAGGDIGTECGGNGVVGNRIQRDMGSEC
GIKGDGVNMGRECGSNGLVGKRVGGDMGSEWWYVGCGEVAGMSTCKGRILKPGDEVEFTF
PVEKMLSSPSTGKFGGGRGRQAAACSEIVRFSTKACGEIGRIPNEWARCILPLVRDKKIR
IEGFCKSAPNILGIMDSVLLSVRVYINSFMFRKSHQTSLKARNNPADDTVVHPLPTLFHL
LGLTPFKKAEFTPSDLYTRKRPLHGQDSSGGPASLLRANLSKSSSSADGDTVENEESISD
TDLDYIVGLADSSELQEMEPPSTLQCELRPYQKQALHWMTQLERGRNMDEAATTLHPCWN
AYCLKDERELVVYLNAFSGDATTEFPSTLEMARGGILADSMGLGKTIMTISLLLSRSERG
GSSGSQSTSQLSSDNGEASNILSQSPTFAKKSAKFSSLDKLLKHKPTLISGGNLIICPMT
LLGQWKAEIEAHAQPGVLSVYVYYGQTRSKDAKVLARSDVVLTTYGVLASEFSAENAEDS
GGLLSIRWFRVVLDEAHTIKSSKSQISNAASALNADRRWCLTGTPIQNNLEDIYSLLRFL
RVEPWGSWAWWNKLIQKPFEEGDERGLKLVQSILSLIMLRRTKSSTDREGRPILVLPPAD
IQVIYCELTEVERDFYDALYKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLV
MSRGDTQEFSDLNKLAKRFLKGGKETGEGKDVPSRAYIQEVVEELRKGEQGECPICLEAF
EDAVLTPCAHRLCRECLLASWRSSNSGLCPVCRNTVSRQELITAPSDNRFQVDVEKNWVE
SSKVSALLSELKRLRSVGSKSIVFSQWTAFLDLLQIPLSRSSIPFVRLDGTLNQQQREKV
IKKFSEEDDISVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRVHRIGQTKQV
MIKRFIVKGSVEERMEAVQTRKQRMISGALTDQEVRTARIEELKMLFA
NT seq 3387 nt   +upstreamnt  +downstreamnt
atggcagcgaaaaagattacagatgagcttgtttcgatggtgcgtacgattgttggggat
gaatatagagagatggacataattagatcacttcacatggcgaaaaatgatccaacagct
gctataaacatcatctttgatactccgagtttcaagaaaattgaaattcggaatacccgt
ttgaattctgatggtggaaatgcaagcagtaatagtggtaagattcaagaatctgagatt
agtagagtttgttcaaatgaaggattggatagtaagagtagaattgagagtgaatttggt
gataatgggttggttggtaatgggattcagtgtgattcggagagtgaatttgagggtaag
aggggtgagggtgatatggggagtgaatgttggggtagtagggtggtgggtaagaggggt
ggggatgaatttgggggtagtgggttgttgggtgagagggctgggggcgatatagggact
gagtgtgggggtaatggggtggtgggtaataggattcagcgtgatatggggagtgaatgt
gggattaagggggatggggttaatatggggagggaatgtgggagtaatgggttggtgggt
aagagggtagggggcgatatggggagtgaatggtggtatgtggggtgtggtgaggtagct
ggtatgtcaacatgtaaagggagaattttgaagcctggtgatgaagttgaatttacgttt
cctgtcgagaagatgttgagttcaccttcaactgggaagtttggtggtgggcgagggcgt
caagctgctgcgtgttctgaaattgtaaggttttctactaaggcttgtggagagattggg
cgtattccaaatgaatgggctcgatgtattctgccgttggtgagggataagaagattaga
attgaaggattttgcaaatcggcccctaacatattggggattatggactctgttcttttg
tcagtcagagtgtatattaacagtttcatgtttcgaaaaagccatcagacatcactaaag
gctagaaacaatcccgcagatgatacagttgttcacccccttccgactttgttccatttg
cttgggcttactccttttaagaaggcagaattcactccgtctgatttatacacgaggaag
cggcctttgcacggacaggacagctccggaggtcctgcctcattattgcgtgcaaactta
tccaaaagctcctcatctgcagatggagatacagttgagaatgaggagtcaatttctgat
accgatcttgactatattgttggtttagctgatagctcggagctacaggaaatggaacca
ccaagtacgctccagtgcgaactgcgaccctatcagaagcaggcgcttcattggatgaca
caactggagaggggaagaaacatggatgaagcagcaaccactctgcatccatgttggaat
gcatactgcctaaaagatgagagggaacttgttgtttacttgaatgcattttcgggtgat
gcgaccactgaatttccgagtacccttgaaatggctagaggaggaattttggcagattcc
atggggctagggaagactataatgactatatctcttctcctcagtcgttctgaaagaggt
ggatcatcaggaagccaatctacaagtcagctgtctagtgataatggtgaagctagtaat
atcttaagtcagtctccaacttttgcgaagaaatcagcaaaattctctagtcttgataag
cttttgaaacataagccaactcttatctccggtggcaatctgattatatgtccaatgaca
ctacttggtcaatggaaggcagagattgaagcccatgcacaacctggggttctatctgtt
tatgtttactatggccagacaagatcaaaggatgcaaaagtgcttgctcgaagtgatgtc
gtgctgacgacatatggggtgttggcctccgaattttctgctgagaatgctgaggacagt
gggggccttctctctattaggtggtttagagtggtgctcgatgaggcgcatactatcaaa
tcctctaaaagtcaaatctcaaatgctgcctctgctcttaatgctgaccgtcggtggtgt
cttactggtacccctatccagaacaatctggaggatatttacagtttgctgagatttttg
agagtcgaaccatggggaagttgggcatggtggaacaagcttattcagaaaccttttgag
gagggagatgagagggggctaaagttggttcaatcaatactaagtctgatcatgttgaga
agaacaaagtctagcacagatagagaaggaagaccaattttagttctaccaccagcagat
attcaagtgatatattgtgaacttacagaagtagagcgcgacttctacgatgcattgtat
aaacgatccaaggtgaagtttgatcagtttgttgagcaagggcgagttctccacaactat
gcttctatattggagttgctattgcgacttcgtcaatgttgcgaccatccatttcttgtc
atgagtcgaggtgatactcaagaattctctgatctaaataagcttgctaaacgtttcctt
aagggtggtaaggagactggagaaggcaaggatgtcccttcacgtgcttatatccaggag
gttgtggaagagttgcggaagggagaacagggagaatgccctatctgtcttgaagctttt
gaagatgcggtgttgactccatgtgctcataggttatgtcgagagtgtctcttggcaagc
tggcgaagttctaattcgggcctttgtcctgtttgtagaaacactgtcagtaggcaggag
cttataacagcaccgtcagacaaccgctttcaggttgatgttgaaaagaattgggtggag
tcatcaaaagtgtcagccttgttgtctgaattaaaacgtcttcgttctgttggttccaaa
agcattgtttttagtcagtggactgccttcctagatctactgcagattcctctttctcgt
agtagtattccatttgttcgccttgatgggacgttaaaccaacaacaacgtgagaaagta
ataaagaagttctcagaagaggatgacatatcggtgttgctaatgtcattgaaggctggt
ggtgttggtataaacctgacggctgcatctaatgcttttgtcatggatccatggtggaat
ccagctgttgaggaacaagcagtcatgcgtgttcatcgtattggacaaactaagcaagta
atgatcaaacgattcattgtgaagggttcggtagaggaaagaatggaggcagttcaaact
aggaagcaacggatgatttctggtgctttgacagaccaagaagttcggactgcaagaatc
gaggaacttaagatgcttttcgcatag

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