Capsicum annuum (peppers): 107848577
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Entry
107848577 CDS
T04646
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1 isoform X1
KO
K27807
short internodes/stylish family transcription factor
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cann03000
]
107848577
Transcription factors [BR:
cann03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107848577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
107848577
NCBI-ProteinID:
XP_016548852
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All DBs
Position
11:complement(179570994..179575134)
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AA seq
363 aa
AA seq
DB search
MWSASSSRQMQINYGLQPEMGMFVVHPASFHHHHHNQESTINFDPHHHHQSINVTSNLSN
TSATNTSLGVGVGVGVIPLLTATPLTNMVSFDDQDLVSRNRGGNDGSGFQFFSNQQPQNS
TNYTKNSTSNILGGGSGNIGGNNNIGGSVSSTSSTTCQDCGNQAKKDCTHRRCRTCCKSR
GFDCTTHVKSTWVPAARRRERQLMAGATTNVNVAAGSSSQSTSSAKKPRLVNSQTTTTAS
HTSTSNNTPPRSFDTSSSHQDASFKASLPGQVRAPAVFKCVRVTSVDEGEDEYAYQAAVR
IGGHVFKGFLYDQGLDEGKNNNNFPNLSDLHLGGGNGNEPSDLYATSTGGGLLGGSNYGN
PIN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtggtctgcatcgtcatctagacagatgcagatcaactatggcctccaaccagaaatg
ggtatgtttgttgtacatccagcatccttccaccaccaccatcataaccaagaaagtacc
atcaattttgaccctcatcatcatcatcagtccataaatgttacttccaatctctctaat
acatctgctaccaacacatctcttggtgttggtgttggtgttggtgtcatcccactcctc
acagccactcctttaacaaacatggttagctttgatgatcaagatttggttagtagaaat
agaggaggaaatgatgggagtgggtttcagttcttttcaaatcaacaaccacaaaattct
actaattatactaaaaatagtactagtaacattcttggtggtggtagtggcaacattggt
ggtaacaataatattggtggctcagtttcatcaacaagttcaacaacttgtcaagattgt
ggtaatcaagcaaagaaagattgtacacacaggagatgtagaacttgttgcaagagtaga
ggttttgattgtacaacacatgtaaagagcacttgggtaccagctgctagaaggcgtgag
agacaactaatggcgggtgcaacaacaaatgttaatgtagctgctggatcttcttctcag
tctacttcaagtgctaagaaacctagacttgtaaattctcagaccactacaactgcttca
catacctctacttcaaataatactcctccaagaagttttgacactagctctagtcatcaa
gatgcaagttttaaagcctcattgccaggacaagtgagggcaccagctgtattcaagtgt
gtaagagttacttcagtggatgaaggagaggatgaatatgcatatcaagctgctgtgaga
attggaggccatgttttcaaaggtttcctttacgatcaagggcttgatgagggcaaaaat
aataataattttccaaatttatctgacttgcatttgggtggtggcaatggcaatgaacct
tctgatctttatgctacttctactggtggaggattacttggaggatcaaactatggtaac
ccaataaattga
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