Capsicum annuum (peppers): 107849730
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Entry
107849730 CDS
T04646
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00040
Pentose and glucuronate interconversions
cann01100
Metabolic pathways
Module
cann_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107849730
Enzymes [BR:
cann01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107849730
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107849730
NCBI-ProteinID:
XP_047257222
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Position
12:227519051..227521076
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AA seq
390 aa
AA seq
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MSHLAIFSLLFIFLFNFSLATNTIYNVQNYGAKSNGQTDSSNAFLSAWKAACASTSPATI
YMPRGNYLIRSAEFNGETCKSKAIIIRIDGTLLAPSDYNVIGNEGSWIKFEKANGVSIFG
GTFDGQGASLWSCKTSGKNCPKGTTALAFYNSNNVVISGVTAQNSQMFHILVDGCHNVKL
QGVKVSSPGNSPNTDGIHIQSSSGVSIMNSRIGTGDDCISIGPGNSNLWIEGIACGPGHG
ISIGSLGWESQEQGVQNVTVKTVTFTGTENGVRVKTWARPSSSFVRAVLFQHIVMSNVQN
PIIIDQNYCPNHESCPNQGSGVKISDVTYQDIHGTSSTEVAVKLNCSKTNPCTGITLDDV
NLSYKDGKADASCVNAGGRASGFEELSHCL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacttagcaattttctcacttctcttcatattcctcttcaacttctcattagca
acaaacaccatttacaatgttcaaaattatggagcaaaatccaatggccaaactgattca
tcaaatgcatttttgagtgcatggaaagcagcctgtgcttctactagcccagccactatt
tacatgccacgtggaaattacttgattcgcagcgcagaatttaatggcgaaacatgcaag
agcaaggctattattatacgtatcgatgggactctcttagctccttctgattataatgtc
attggcaatgaaggaagttggattaagttcgaaaaagccaatggagtttctatctttggt
ggaacatttgatggtcaaggtgctagtctttggtcttgcaagacctcaggcaagaactgc
cctaaaggaactacggcactggctttttacaactcaaacaacgttgtaataagtggagta
actgcacaaaacagccaaatgtttcatattttagtagacggttgccataacgtgaagcta
caaggagtgaaggtgtcatctccaggaaatagtcccaacactgatggaattcacatacaa
tcatcgtcaggagtgagcattatgaactcgcgtattggtactggagatgactgtatctca
atcggccctggaaattctaacttatggatcgaaggcattgcttgtggccctggccatgga
atcagcattggaagcttaggttgggaatcacaagagcaaggagttcaaaatgtgacagtt
aagactgtgactttcactggaacagaaaatggtgtgagggttaaaacttgggcaaggcct
agtagtagctttgttagagctgttctctttcaacatattgttatgtctaatgttcaaaac
ccaatcatcatagatcaaaattactgtcctaatcatgaaagttgtcctaatcagggatct
ggcgtgaagataagtgatgtaacatatcaagacatacatggaacatcgtctacagaagtt
gcagtgaagttaaattgtagcaaaacgaatccatgtactggaataacacttgatgatgtg
aatcttagttataaagatggtaaagctgatgcttcatgtgttaatgctggaggaagagcc
tctggttttgaagaacttagtcactgcttataa
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