Capsicum annuum (peppers): 107850337
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Entry
107850337 CDS
T04646
Name
(RefSeq) SWI/SNF complex subunit SWI3D isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107850337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107850337
03036 Chromosome and associated proteins [BR:
cann03036
]
107850337
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107850337
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107850337
PBAF complex
107850337
GBAF(ncBAF) complex
107850337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
107850337
NCBI-ProteinID:
XP_016550276
LinkDB
All DBs
Position
8:169069608..169085298
Genome browser
AA seq
944 aa
AA seq
DB search
MEEKRKDTGTPPPPSADTPPISADAPSVEPPTSRRRGGGHKRKASAIGSGASSTPPSTLS
KRQKQSAVPFPPIHNGPLTRARQQPNHAAAAAAAAAGSPSGFGFTIESEVFPKAEAGVEE
AVRVEKESNQVKEDLEALEAEIEAEIESIGSRDRNVHIVPTHAGWFSWTKVHPLEKRTMP
SFFNEKLQSRTPEIYMQIRNWIMKKYHTNPNIQIELNDLSELSAGDLDVKQEVMEFLDYW
GLINYHPFPQTNSVMNVDIDGDKAARTDSLIDKLFRFESDETWTPVLPRSSVATPSVSSG
FFPESAIAEELKSEGPAVEYHCNSCSADCSRKRYHCQKEADFDLCSECFNNGKFGSGMSP
SDFIVMEPGEVGSASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIEM
PIEDRFLDTDAESNKLVKEKEDAVLSKDDTSASKDAPETTETKDDGNDDQLSSTVETSKP
ENVNGPIPQEEVGENCALNALRDAFTAVDFYPPPGERASFAEAGNPVMALAAFLVKLVEA
KKVSASVRSSLKSISGNPSGEQLALRHCFILEDPPDDGKTSSDSDRPANGSVDPEHKKDE
DDNVEMQEEKLTSVIDEKSLSVGQDKETKGETNIDKKCEERDGENHEEKNEKELEVATHL
VSTSDKSQEKSDTSKQSGAISTDKEGESASLKKPDDAGLAVGQTPSTTAESNVLTSKLEV
PPGFEKESVDEASMAIPSNSPDTPKDEDMMPAVQTKEPEQSMKSNIVLENGKNTGTVEVK
DSVDGRKDPLKIKNDLDIDKIKRAAVTALSAAAVKAKYLADQEEDQIRLLTTALIEKQLH
KLESKITFFHDMDNVVMRVRELLERSKQRLVSERQQIINARRAGPQPVLANRPGMTLANS
APRLPTAMSSPRIPNSRPIMAGAPTPSSFMPTTVSGNSMQPSNR
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaacggaaggacaccggaactccaccaccgccgtccgccgacacgccgccg
atatcggctgacgctccgtcagttgaaccacctacgtcgcgtcggagaggtggcggccac
aaacgaaaagcaagcgccattgggagtggcgctagttctactcctccctcaactttatcg
aagcgtcagaaacaatcagcagtacctttcccaccgatccacaatggtccgctcacaaga
gctcggcagcagccaaaccacgccgcagctgccgccgccgccgcagctggttctccgtca
ggttttggttttacgatcgaatcggaggtgtttccgaaggccgaggcaggtgtagaagag
gcggtgagagttgagaaagagtcgaatcaagtgaaggaggatttggaggcattagaggct
gaaattgaagctgaaattgagtcaattggatcccgagatcgtaatgttcatattgtgcct
actcatgcaggttggttctcttggacgaaggttcatcctttggagaagcgaacaatgcca
tcattcttcaatgagaagttgcaaagtaggactccagaaatatacatgcagatacggaat
tggatcatgaaaaagtatcacactaaccccaatattcaaattgagttaaatgatttgtcc
gagctctcagcaggagatttggacgttaaacaggaagtgatggagtttttggactactgg
ggtttaattaattatcaccctttcccacaaaccaattcagttatgaacgttgatattgat
ggggacaaggcagcaaggacagattctttgattgataaactgtttcgattcgaatcagat
gaaacgtggaccccagttcttccaaggtctagtgtagctactccttctgtgtcttctggg
ttctttccagagtcagcaattgctgaagaactaaagtccgaagggccagctgttgagtac
cattgcaactcttgctcagctgactgctcgagaaagcggtatcattgccaaaaggaggca
gattttgacttgtgtagtgaatgcttcaataatgggaagtttggatctgggatgtcccct
tcagatttcattgttatggagcctggtgaggttggcagtgcaagtggtggaaagtggaca
gatcaggagactcttcttctccttgaggcattagagctgtataaggaaaattggaatgag
attgcggagcatgtggctacaaagactaaagctcagtgtattctgcatttcattgaaatg
ccaatagaggataggttcctggatactgatgctgaaagtaacaagcttgttaaagaaaaa
gaagatgcagttttgtctaaagatgatacatcagccagtaaagatgccccagaaacaaca
gaaaccaaggatgatggaaatgacgatcagctttcatccacagtggaaacatcgaaacca
gagaatgttaatgggccaattcctcaggaggaagttggtgagaactgtgcactcaatgca
ctgagggacgcatttacagctgttgatttttatcctccacctggcgaacgtgcttcattt
gctgaagctggcaatcctgtaatggcattggcagcattcctggtgaaactggtagaagct
aaaaaggtttctgcctcagtgcgcagctctttgaaatccatttctggtaatccttctggt
gagcagctagccttaaggcactgttttattttggaagatccaccagatgatgggaagaca
tcatctgattcagatagacctgctaatggatcagttgatccagagcataagaaagatgag
gatgacaatgttgaaatgcaggaggaaaagttgacatcagttattgatgagaagagtttg
tcagttggacaagataaagagaccaaaggtgaaacaaacattgacaaaaagtgcgaagag
cgggatggtgaaaaccatgaagagaaaaatgagaaggaacttgaagtagcgacacatttg
gtttctacgagtgacaaaagtcaggagaaatctgatacttcaaaacaatctggtgcaatt
tctactgacaaagaaggggaatctgcatcacttaaaaagccagatgatgcaggcttggca
gtgggacagacaccaagtaccacagcagaatcaaatgttttaacgtctaaactagaggtc
ccacctgggttcgaaaaggagtcagttgatgaagcttcaatggccattccttctaactct
ccagatactccgaaagatgaggacatgatgcccgctgtgcaaacaaaggagccagagcaa
tccatgaaatcgaacattgtacttgaaaatggcaaaaatacagggaccgtagaagtcaaa
gactctgtagatgggagaaaagatccattgaagatcaaaaatgatctggatattgataag
atcaaacgtgcagcagtcactgctttgtcagctgctgcagtcaaggcgaagtatcttgca
gatcaagaagaggaccaaattcggctgcttacaacggcattaatagagaagcagttacac
aagctggagagcaagataaccttctttcatgacatggataatgtggttatgagggtcaga
gaactgttggagaggtcaaaacagaggcttgtcagtgagcgtcaacaaataattaatgca
agacgtgctgggccacaacctgtacttgctaaccggcctggaatgactcttgctaattca
gcacctaggcttccaactgcaatgagctccccaaggataccgaattcaagacccataatg
gcaggagcccctacaccaagctcttttatgcctacaacagtttcaggaaattcaatgcag
ccttcaaacagatga
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