Capsicum annuum (peppers): 107850341
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Entry
107850341 CDS
T04646
Name
(RefSeq) protein SDA1 homolog isoform X2
KO
K14856
protein SDA1
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cann03009
]
107850341
Ribosome biogenesis [BR:
cann03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107850341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
Motif
Other DBs
NCBI-GeneID:
107850341
NCBI-ProteinID:
XP_016550284
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All DBs
Position
12:231916915..231935336
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AA seq
817 aa
AA seq
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MSPVSGCHALSELTAEGISASGLTSEKLSLPILQSKMKCDPEGYLSELKLVYKQFKSSVD
LLEQQAALNFTSLSGVSTDPTVSKDLGDRAMFLAHVTPFYTKELEKFPNELANLLNSSAR
SLPSGLRVHVTQALILLINRKIVDIGETLALFMELQTLGDRVLRKLAFSHVIHSIRHMNQ
KHKNDKKNRALQNVLFALLQQEDEAKAKRSLITLCELHRRKVWFDDRTANAICSACFHSS
SRIMIASVSFLLDYEKIEDDSDSDMSDSEDEQPASQPQVVLNKEAIYKANNKGTSSSKKK
KQAKLQRAVRSMKKQQRMQSENNNSSYYSPLNHLKDAQGFAEKLFSRLQTCNERFEVKMM
MLKVIARTVGLHHLILLNFYPYLQRYVQPHQRDVTNLLAAAVQACHDMVPPDAVEPLFKQ
VVNQFVHDRSRPEAISVGLNVIREICLRMPLLMTEDLLQDLVLYRKSNEKAVSAAARSLL
TLFREVCPSLLVKKDRGRPTNPKARPKEFGEVSVASSVPGIELLDQDDDDSDDDVEEGSI
GLSDHDDRSDENVDPGEEDVNCENDEDNASDDESGADHQSYDECDSDEDNKSQVAEEFSE
DDAIDSADATDDDESDGDEEDIDGSKMQDNNSSASEGDDVDEKESQGIKRKISDIDVNAA
SNSLRALKKLAGAKMENNSLNMEDGILSNEDFKRIKELKAKKDARNVLAQHGFKLPSSDQ
LSTKRVDAAKLEVNIRKKLSKEERLAIIRAGREDRGRYQAKTALKKKKTGGSSNQQKEHK
KFMPIAAKRSKLARSKIEKKRKQQRAGKQFRGRKAWK
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtctccagtttccggctgccacgcgctgtcggagctaacggcggaaggtatctccgcc
tccggattaacatcggaaaaactaagccttccaattctccaatcaaaaatgaaatgcgat
ccggaaggctatttatctgagctaaaactagtgtacaaacaattcaaatcctccgtcgac
ctcttggaacaacaagcagcgttgaatttcacttcgcttagcggtgtatcaactgatcca
actgtgtcaaaggatttaggtgatagagcgatgtttttagcacatgtaactcctttttat
acgaaagagcttgaaaagtttcctaatgagttggcgaatttgttgaattcttcggcgagg
agtttgccttctggtttacgtgttcatgttactcaagctttgattttgctcattaatcgg
aagattgttgacattggggaaacacttgcattgttcatggagctccaaactctgggggat
agggttttgagaaaattggctttctcacatgttatccatagtattagacatatgaatcag
aagcacaagaatgataagaagaatcgggcacttcaaaatgttttgtttgccttgctgcag
caagaggatgaagcaaaagcaaaaagatcgctcatcacactttgtgaacttcatcgaaga
aaggtgtggtttgatgatagaacagcaaatgctatatgctcggcatgctttcattcatca
tcaaggattatgattgcctctgtatcctttcttcttgattacgagaaaattgaagatgat
tctgatagtgatatgtcagacagtgaagatgagcagccagccagccagcctcaggttgtg
ctaaataaagaagctatttataaggcaaataataagggtacatcgtccagcaaaaagaaa
aagcaagcaaagttgcagcgtgccgttcgcagcatgaagaagcagcagcgcatgcaatcc
gaaaataacaacagtagttattattccccattaaaccacttaaaggatgctcagggattt
gctgaaaagctgttctcacgtcttcaaacttgcaacgagaggtttgaggttaagatgatg
atgctgaaagtaattgcccgcacagttgggcttcatcacttgattttgttgaacttctat
ccttaccttcagagatatgttcagccccatcagcgtgatgtgacaaatttgcttgctgca
gcggtccaagcatgtcatgatatggtgcctcctgatgcagttgaaccattgtttaaacaa
gtagttaatcagtttgtgcatgatcgttcaaggcctgaggccatatctgttggactcaac
gtaatccgagaaatatgcttacgcatgcctttgttgatgacagaagatttgctacaagac
cttgtgttgtatagaaaatcgaatgagaaggcagtttctgcagcagctcgatcacttctg
actttgttcagagaggtttgcccttcacttctagttaagaaggacagagggcgccctaca
aacccaaaagcaaggcccaaggaatttggtgaggttagtgttgccagcagtgttcctggc
attgagttgctggatcaggatgatgatgatagtgatgatgatgtagaggaggggtctatt
ggcttgtctgaccatgatgatcgaagtgatgaaaatgttgaccctggcgaagaggatgtc
aactgtgaaaacgatgaagataatgcttctgacgatgaatccggtgctgatcatcaaagt
tatgatgaatgcgatagtgacgaagataataaatcacaagttgctgaagagttttcagaa
gacgatgcaattgatagtgctgatgccactgatgatgatgagagtgatggcgatgaagag
gatattgatggtagtaaaatgcaggataataatagctcggcttctgaaggggatgatgtg
gacgaaaaggaatctcaaggaataaaaaggaaaatatctgatattgatgtaaatgctgcc
agtaatagccttcgtgctttaaagaaattagcaggggcaaaaatggaaaataactccttg
aatatggaggatggtattctatctaatgaggacttcaaaagaatcaaagaactcaaggcc
aaaaaggatgcacggaacgttttagcacagcatggatttaagcttcctagctcagaccag
cttagcactaaaagagttgatgctgctaaacttgaggttaacatacggaagaagcttagc
aaggaagagagactggcgattatccgggctggcagagaagatagagggagataccaggct
aaaactgctctgaagaagaaaaagacgggtggttccagcaatcagcaaaaagaacacaaa
aagttcatgccaatagcagcaaagagatccaagttagcaagatctaagatagagaaaaag
aggaagcagcagcgcgctggcaaacaatttcgagggagaaaagcttggaagtaa
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