Capsicum annuum (peppers): 107850343
Help
Entry
107850343 CDS
T04646
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cann03110
]
107850343
Chaperones and folding catalysts [BR:
cann03110
]
Heat shock proteins
HSP100
107850343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
nSTAND3
TniB
AAA_14
AAA_18
NACHT
AAA_28
Mg_chelatase
Zeta_toxin
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
AAA_23
Motif
Other DBs
NCBI-GeneID:
107850343
NCBI-ProteinID:
XP_016550293
LinkDB
All DBs
Position
12:complement(175115948..175129720)
Genome browser
AA seq
923 aa
AA seq
DB search
MARALVQSTSIPSSVAGERTTKFNEFGKTKRTVTMLWNAQSSSLRLRDFTGLRGCNAIDT
LVRSGQTLQSKVAAATSARRPRGCRSVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESNEAVG
ASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI
KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDDALVAAAQLSYQYISDRFLP
DKAIDLIDEAGSRVRLRHAQLPEEAKELEKELRQITKEKNEAVRGQDFEKAGELRDREMD
LKAQITALIDKNKEMSKAESEAGDTGPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLKM
EETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY
FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLEYDEKD
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKGKEI
ELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVDVDSD
GNVTVLNGSSGTPSDPAPEPIPV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagctctagttcagtcaacaagcatcccatcgtcagttgctggtgaaaggacg
accaaattcaatgaatttgggaaaacaaagagaactgttacaatgctgtggaatgcacaa
tcatcttcgctaaggctgagggattttacgggattgcgaggatgcaatgcaatagataca
ctagttagatctgggcaaacgctccaatccaaggtagctgctgcaacttctgccagacga
ccacgaggttgccgatctgtaccaaaagcaatgtttgagcgcttcacagagaaggcaata
aaagtcattatgcttgcacaagaagaggccaggcgacttggtcataattttgttggcaca
gagcagattttgttgggtcttataggtgagggaactggtattgctgccaaggttcttaaa
tcgatggggatcaatttgaaagatgctcgtgtggaagtggagaagataattggaaggggt
agtggatttgttgctgttgagatcccttttacccctcgtgccaaacgtgtgctggaactc
tctctggaggaagcccgccagctaggacataactatattggttcggagcacttgctactt
ggattgctgcgtgaaggtgaaggtgtggctgcccgtgtccttgaaaatttgggcgctgac
cccagcaacatccgcactcaggtgatccgaatggttggtgagagtaatgaggctgttggt
gctagcgttggaggtggaacttctgggcaaaaaatgcctacactggaagagtacggaaca
aatttgacaaaactagcagaagaggggaaattggatcccgttgttggaagacagccgcaa
attgaacgggtcactcaaatcttgggtcggcggactaagaacaacccgtgtcttattgga
gaaccaggtgttggcaaaacagctattgctgagggtttggcacaaagaattgcaaacggt
gatgtccctgaaacaattgaggggaagaaggtgataactcttgatatgggtttgcttgtt
gctgggacaaaataccgtggagagtttgaggaaaggttaaagaagctaatggaggaaatc
aaacagagtgatgaaataatactatttatcgatgaagtgcatacattgattggagctgga
gcagcagagggggccatcgatgctgctaacatcttgaaacctgccctagctcgaggtgaa
ctacagtgtatcggagctactacactggatgaatacagaaagcatattgagaaagatcct
gcactggagaggagattccagcctgttaaggtccctgaacctactgttgatgaaactata
cagattctgaaagggcttcgtgagaggtatgagattcatcacaagcttcgttacactgat
gatgccttagtggctgctgcccagctctcataccagtacatcagtgaccggtttctgcct
gacaaagcaattgacttgattgatgaagctggttctcgtgttcgacttcgccatgctcag
ctcccagaggaagcaaaagagctcgagaaagagcttcgtcagattacaaaagagaagaat
gaagctgtccgtggtcaagatttcgaaaaggctggggaattacgtgatagagagatggat
cttaaggcacagatcacagccctcatagacaaaaacaaagagatgagcaaggctgaaagt
gaggctggagatacaggtcctcttgtgactgaagcagatattcagcacattgtctcttct
tggactggtatccctgttgagaaggtctccactgacgaatctgatcgcctcctaaaaatg
gaagaaacacttcacactcgaatcattgggcaggatgaagctgtcaaagccattagtcgc
gctattagacgtgcacgagttgggctcaagaatcccaaccggcctattgctagtttcatc
ttttctggtcccactggtgttgggaaatctgaactggcaaaggcactggctgcatattac
tttgggtccgaagaagcaatgatccggcttgatatgagtgagttcatggagagacacaca
gtctctaagctcattggatcgccccctggttatgttggttacacagagggtggtcaattg
actgaagctgtaaggcgtcgaccttatacggttgtgctctttgatgagattgagaaggct
catcctgatgtgttcaacatgatgcttcaaattcttgaagatggaaggttgacagacagc
aagggaagaactgtagatttcaagaatacacttctaatcatgacgtcaaatgttggaagt
agtgtgattgagaaaggtggccgtcgtataggttttgatcttgaatacgatgagaaggat
agcagttacaatcgtatcaagagcttagtgactgaagaattgaagcagtacttcaggcca
gagtttttgaacagattggatgagatgattgtattccgtcagctcactaagttagaggtt
aaggagatagctgatatcatgcttaaggaggtatttgagaggttgaaaggtaaagagata
gaacttcaagtgacagagaggtttagagacagggttgttgatgagggatacaaccctagc
tatggagcacggcctctgagaagagctattatgagactcttagaggacagcatggctgag
aaaatgcttgcgggtgagattaaagaaggcgattcagttattgtggacgttgattccgat
ggtaatgtgactgtcctcaatggcagtagtggtactccctcagatccagcccctgagcct
atccctgtgtag
DBGET
integrated database retrieval system
