Capsicum annuum (peppers): 107850391
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Entry
107850391 CDS
T04646
Name
(RefSeq) KH domain-containing protein HEN4 isoform X3
KO
K21444
poly(rC)-binding protein 3/4
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107850391
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
107850391
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_5
Motif
Other DBs
NCBI-GeneID:
107850391
NCBI-ProteinID:
XP_016550364
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Position
12:complement(198115795..198134832)
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AA seq
614 aa
AA seq
DB search
MDTSLVQKRHLDTPAASTPTAKRRHLSTATSFRTPPPPPPPSLFPKLSPGETFFKILCPA
DKTGGLIGKGGATIRQVREETGAKIRIDDSLSGCDERVIVIIANCNVEEVVNDEELSLSM
SASQAQRALIRVFERILKVDEEGNAEGEGRKDINVVCRLLAPSYQVGCVLGRGGKVIEKI
RLESGAQVRVLSNDQIPPCASPGDELIQIAGTLSTVRKALLSVSSCLQDNSRIDLVNLST
PKFSGMSQDGTGYHTPEQFSRSSGVESAGINHRMVLEEEVVFKVLCPADKVGNLIGKGGS
IVRVIQTETGASIKVADSASHLDDRVVVISARENLDQRHSPAQEALMRVQGRIAEIGFEP
GAAVVSRLLVHARHMSCLFCNGSILIAELRRVTGAGIRIFPREQSPKYGSHTEEVLQVIG
SIQSVQDALFQITCRLRDAMFPLKPHVSNIAPPHFPPYAEIPSPSFRPRHDPASPSYHSP
VGYPHDRAPHFYGYERQGHVPFFDRPPSPGRWGPQAVNSRYTAGMADCSSGSETAPNFPG
ITIEIVIPQMLLKYVYGEDSSNLRDITRISGAKIVIHDPVAGATEGTAVVSGTPDQTRFA
QTLIHAFIFAEQNM
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggacacatctttagtacaaaaacgccatttagacacacccgcagcctccactcccacc
gccaagcgccgccacctttccaccgcaacttccttccgtacaccaccaccgcctcctcct
ccgtcgctttttccgaagctctctcccggtgaaactttcttcaaaatcctctgtccggct
gataaaactggcggcttaatcggcaaaggtggcgctacaatccgccaggttagagaagaa
accggtgccaaaatccggattgatgattcgctatcagggtgcgatgagcgtgttatagtt
attatagctaattgcaatgtggaagaagttgtgaatgatgaggagttgtcgttgtcgatg
tcggcatcgcaggcgcagcgagcgttgattagagtttttgagaggattttgaaagtggat
gaggaagggaatgcggaaggcgaagggaggaaggatataaatgtggtttgtaggttgtta
gcaccgagttatcaggttggttgcgtgcttggaagaggagggaaggttattgagaagata
agattagagtctggagctcaagttagggttttgtcaaacgatcagattcctccttgtgct
tcacctggcgacgagttaattcagattgctggaaccctttcaactgtgagaaaagctctg
ttgtctgtttcaagctgtcttcaggataactcaaggatagatttagtaaatctctctact
ccaaaattttcagggatgtcacaagatggaactggttatcacacgccagagcagttctca
aggagttctggtgttgagagtgctggaatcaaccacaggatggtcttggaggaagaagtt
gtgtttaaggtgttgtgcccagctgacaaagttggaaatttgataggaaaaggtggctca
attgttagggtgatccagactgaaactggtgcatctatcaaggttgctgattcggcatct
catttagatgacagagttgttgtgatatctgcaagagagaacctggaccaaagacattcc
cctgctcaggaggctcttatgcgtgtgcaaggcagaattgctgagattggatttgaacca
ggagctgcagttgtatcaaggcttctggtacatgcacgtcacatgagttgtctcttttgt
aatggaagtatcctaattgctgaattgcgacgagtcaccggtgctggcattcgtatattt
cccagagaacaatctccaaaatatggttcccatacagaagaagttttacaggttattggt
agcatacagtctgtccaggatgctttgttccaaattacttgtaggcttcgggatgcaatg
tttcctctgaaaccacatgtatcaaatattgcccctccgcattttcccccctatgctgaa
attccatctccatcattcagaccaaggcacgatcctgcttctcctagttatcactcacct
gttggctaccctcatgatcgtgctccccatttctatggctacgagagacaagggcatgtt
cccttttttgatagacctccttcaccgggaagatggggtcctcaggcagtcaattcaagg
tatacagctggaatggctgattgtagcagtggcagtgagacagcacctaattttccaggc
attactattgaaattgtaattcctcagatgttgttgaagtatgtttatggagaggattct
agtaaccttcgtgatataactaggatttcaggtgctaagatagtaattcatgatcctgta
gctggggctacagaaggcactgctgttgtgtctggaacaccagatcaaacgcgattcgct
cagacccttattcatgctttcatctttgctgagcagaacatgtag
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