Capsicum annuum (peppers): 107850529
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Entry
107850529 CDS
T04646
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107850529
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107850529
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
CR_prot_dom_plant
CREPT
POL2_thumb
Motif
Other DBs
NCBI-GeneID:
107850529
NCBI-ProteinID:
XP_047256462
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All DBs
Position
12:<1145628..1158246
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AA seq
567 aa
AA seq
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MGDDAFDGKLLSEKLSKLNSSQQSIESLSRWCISHRKKAKQVVETWDKSFRSAQRDQRVS
FLYLANDILQNSRRKGSEFVNEFWKVLPASLKLVSETGDENGKKVASRLVDIWEERKVFG
SRGQNLKDEVLGKKSSAPSVSNGKSSNPIKVVKKDAHSVRMKLAVGCTPEKIVTAFQLVH
DENVNEEDALNKCKDAVFRVGEMGRDIDNLSSQGNLQGSELMDKMQEQENILEQCISHLE
NAESLRVTLISQLKDALQDQESKLELLRMGLQVARGQIELAKNGRRRLTSPSIAVPPLNT
GNLPIEVTRTTEPTPPSVPLTKIPPPLPPPPPPPPNPATFANSKTNEEESKRSVAAAVAA
KLAASTSSAQMLTSVLSSLVAEEAASLSSGLKSTGFSSSLPFASPEKRLKLDKPMTFSDV
NSSEGGSSARLTSSQQLITSTPLAPPSVLQSVSKSNQMQAPFLPPPPPPTLPPASQFVQS
TAMMMGVMPYGYSAGFQPPLSSQIAMGPGPGPGPRPPPPPQQAQQPQLQTQQPQSQQQPA
NSGFYRPPGIGFYGQAHQQTTPAAPRQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgatgcttttgatggcaagctattgtcagaaaaattgtctaagcttaacagt
tcacaacaaagcatagaatctttatcacgatggtgcatttcacatcgtaagaaagccaag
caggtcgttgaaacgtgggataaatcattcagatctgcacagagggatcagcgtgtttca
tttctgtatttagccaatgatattctgcaaaatagtcggcgcaagggtagtgagtttgtt
aatgagttctggaaggtccttcctgcatctctgaagcttgtttctgaaaccggtgatgaa
aatgggaagaaagtggcttctagactggttgatatatgggaagagagaaaagtttttgga
tccaggggtcagaatcttaaagacgaagtgttgggcaagaagagttcggctccgtcagta
agcaatgggaagagctcaaatcctatcaaagttgttaaaaaggatgctcactcagtaagg
atgaaattggctgttggctgtactccagaaaaaatcgtaacagcattccaactggttcat
gatgaaaatgtgaatgaggaagatgctttgaacaagtgtaaagatgcagtttttcgtgtt
ggagaaatgggaagagatattgataacctttcctctcaaggaaatctccagggttctgaa
ttgatggataagatgcaagagcaagaaaacatacttgagcaatgcatcagccaccttgag
aatgctgaatcattgagggttaccttgatttctcagctgaaagatgcacttcaagaccaa
gaatctaagctagagttgttacgcatggggctgcaggttgcgcgtggtcagattgaacta
gcgaaaaatggaagacggaggctgacatctcccagcattgctgttccaccattgaatact
ggtaaccttccaattgaagtcacgagaacaactgaaccaaccccaccttcagtgccatta
accaaaataccaccacctttgcctccacctccacctccacctcccaatcctgccactttt
gcaaattccaaaactaatgaagaggaaagcaaaaggtcggtagcagctgctgttgctgca
aaacttgctgcttcaacatcttctgctcaaatgctgacctctgttctttcatcccttgtt
gctgaagaagctgcatcactgagcagtggattgaaatcaactggcttctcatccagctta
ccttttgcatccccagagaaacggctcaagttagacaagccaatgactttttctgatgtg
aacagttctgaagggggtagctccgctcgcttaacttcatcacagcaattgattactagc
actcctcttgccccgccctcggttttgcaatctgtgtccaagtcaaaccagatgcaagct
ccattcctacctccaccacctccaccaactttacctccagcaagtcagttcgttcaatct
acagctatgatgatgggggtgatgccatatggatatagtgccgggtttcaaccacctctg
tcttctcaaattgcaatgggcccggggccggggccggggccgaggccacctccaccaccc
cagcaagcgcaacagccacaactgcagactcagcagccacaatctcagcagcagcctgcc
aacagtggattttatcgtcctcctggtattggattctatggacaggcccatcagcagacg
actccagcagcaccccgacagtaa
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