Capsicum annuum (peppers): 107850723
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Entry
107850723 CDS
T04646
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107850723
03041 Spliceosome [BR:
cann03041
]
107850723
03036 Chromosome and associated proteins [BR:
cann03036
]
107850723
Enzymes [BR:
cann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107850723
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107850723
mRNA cycle factors
Common to processing body (P body) and stress granule
107850723
Spliceosome [BR:
cann03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107850723
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107850723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
107850723
NCBI-ProteinID:
XP_016550932
LinkDB
All DBs
Position
12:complement(232939891..232946080)
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AA seq
601 aa
AA seq
DB search
MPTSWADSVSAADNLASAARPKSSYVPPHLRNRPTSTDPPPQASYAGPAASSQEQSGYGG
PNVGGNRWSGPRNDFRSGYSGGGGRVGGWNNRTGGWDRGREREANPFVDDDVESFVETEN
SGINFDAYEDIPVETSGENVPPPVNTFLEIDLGEAVNQNIRRCKYVKPTPVQRHAIPIAL
AGRDLMACAQTGSGKTAAFCFPIISGIMRGQFPRPPRPRVAFPLALILSPTRELSCQIHD
EAKKFAYQTGVRVVVAYGGAPINQQLRELERGVHILVATPGRLVDLLERARVSLQMIRYL
ALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLALDFLSNYIFLA
VGRVGSSTDLIVQRVEYVQETDKRSHLMDLLHAQRANGAHGKQALTLVFVETKKGADSLE
HWLCMNGFPATAIHGDRTQQEREYALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDI
PNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSVARALADLMQEANQEVPVWLSRYAARS
THGGGKNRRGGNRFGGRDFRKDSSFNRGVTDYYGGANMSRGYGAPGGYPAPYSGAVTSAW
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccaacatcctgggctgattcggtttctgcagccgataatctggcttctgctgctcga
cccaagtcatcgtatgttccaccacatctcaggaacaggcctacttcaacggatcctcct
ccacaggcttcctacgctgggcctgctgcatccagtcaggaacaaagtggttatggtggc
ccaaatgtaggtggaaatcgttggagtggtccaaggaatgatttccgatctggttatagt
ggtggaggaggccgtgttggtggctggaataacagaacaggtggttgggatcgtgggagg
gagcgggaagctaacccctttgtagatgatgatgttgaaagctttgttgaaacagagaat
tctgggatcaactttgatgcatacgaggatattcctgtggagacgagtggggaaaatgta
ccccctcctgtgaacacttttcttgagattgatttaggtgaagctgtcaaccaaaatatt
aggagatgcaagtatgttaaaccaacccctgtgcaaaggcatgctataccaattgcactt
gctggtagagatttgatggcttgtgctcagactggttctggaaaaacagctgctttctgc
tttcccatcataagtggaataatgaggggccaatttccaagacctcctcgtccgcgtgtg
gcatttccgctggctcttattctttctcccacaagggagctctcatgccaaattcatgat
gaagctaagaaatttgcatatcagacgggtgtcagggtggttgttgcttatggtggtgct
cccataaaccaacagcttcgagagctagagagaggagtgcatattcttgtggcaacacct
ggacggttagttgatttacttgagagagctagagtctcgttacagatgataaggtacttg
gctctagatgaggcagatcgaatgcttgatatgggtttcgaacctcaaataaggaaaatt
gtgcaacaaatggacatgcctccacctggtgtaagacagacaatgctattcagtgccact
tttcccagagagattcagagactggcattggattttctttcaaactatatcttcttggct
gtgggaagggttggctctagtactgatctgattgttcagcgagttgaatatgttcaggag
actgacaagagaagccacttgatggatcttcttcatgcacagagggcaaatggtgctcat
ggcaagcaagctcttacccttgtttttgtcgagacgaaaaaaggagctgattcattggag
cattggctttgtatgaacggtttccctgctactgctattcatggcgatagaactcagcag
gaaagagaatacgctctgagatccttcaaaagtggtaatacaccaatcttggttgctacg
gatgtggcagcacgtggtcttgatataccccatgttgctcatgttgtcaactttgacatt
ccaaatgacattgatgattatgtccaccgtattggaagaacagggcgagcaggaaaatca
ggtttagcaacagccttctttaacgagaacaattcttcagtggcaagagcactggctgat
ctgatgcaagaagcaaaccaagaagtacctgtttggctctctcgctatgctgctcggtct
acacatggaggcggcaaaaatcgtcgtggtggaaatcgttttggcggccgtgatttccga
aaagattcctctttcaatcgaggggtcacagactactacggtggggccaatatgagcaga
ggctatggtgcacccggtggatatcctgcaccctatagtggtgctgtgactagtgcctgg
gactaa
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