Capsicum annuum (peppers): 107850804
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Entry
107850804 CDS
T04646
Name
(RefSeq) KH domain-containing protein HEN4 isoform X2
KO
K21444
poly(rC)-binding protein 3/4
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107850804
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
107850804
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
Secretin_N
Motif
Other DBs
NCBI-GeneID:
107850804
NCBI-ProteinID:
XP_016551054
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Position
12:complement(5006158..5027966)
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AA seq
618 aa
AA seq
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MNHQNHHRPAIKHGVSSGASAVSGGGSGGEVHFRLLCHVNTAGGVIGNSGGLIRQLEAQT
GCKIRLEDPLPHWHERVINIIGDSIIDRKIMMKCDNSSDEVELVEVSRAQEGLVRVYERI
LQIEGSGGAEKNGSVGCRMLAISSQIGALIGKGGVIVDGIRKSTGAKIKVLNKEQLPPCA
VPEEELIQIMGAIVAVKKALVHVSRRLQIRLPAERNTPHVTSKGALHEQSVDFPLDAKSS
IQPLARNAVNHSPVAHSLSSDFDSALNLDADCAQRKVVFRLLCSYVAAGGVIGRGANIVK
GLEKDTGASIKFSTPALRSKERVATISSLETLEPLYSPAQVATIRVFERSVDVIREHGFI
KDGSISARILVGPREIKCLLDERGRFSSDVGSTTGVEVQLFGAEHAPNCAEEHDTVVQII
GEHDNVKNALFQLTGKLREMVFSSLVSEGAAPKNYSGSSHSHGGQHEFGISMPSQSPDHL
SSFSSHYQTDHLGFGPKLGGPHTMLPDKQSKDRKNTKMSKPIKQSMSSWKSSHGEIESGR
MQEAGAAKKTVVKNVSEQNFNSVYGENGSNLTRLKEISGAAVILQTPGPGECDGKVIISG
TPEQIQMAESLLQAFILA
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaccaaaaccaccaccgtccggcgatcaaacacggcgtcagcagcggcgcctcc
gccgtcagcggcgggggaagtggaggagaagttcatttccgattactctgccacgtcaac
acagctggcggagtaatcggaaactcaggcggtttaatccggcagctggaagctcaaacc
gggtgtaaaatccggctcgaagacccgttaccacattggcacgaacgggtcatcaacatc
attggtgactcaattatcgatagaaaaatcatgatgaagtgtgataatagtagtgacgaa
gttgaactagtagaagtctcgagagcacaagaaggtttggttcgtgtttacgaacgtatt
ttacagattgaaggaagtggtggagctgaaaaaaacgggtcagttgggtgtagaatgctt
gcaatttcgagtcaaattggtgcattaataggaaaaggtggtgtcattgttgatggtata
aggaaaagtactggtgcgaagattaaggttttgaataaggagcaacttccaccttgtgct
gtaccggaagaagagttgattcagataatgggtgcaattgttgcagtaaagaaagcacta
gttcatgtttctcgacgtcttcaaattcgcttaccagctgagagaaacacaccccacgtt
acttcaaaaggtgcattgcatgaacaatctgtggactttcctttggatgcaaaatcctca
atacaaccgttagcgagaaatgctgttaatcattctccagttgcccattcattatcatcc
gattttgatagcgcattgaatctggatgctgactgtgctcaaagaaaagtagtctttaga
ttgctttgctcttacgtcgctgctggaggtgtgattggcaggggtgctaatattgtgaaa
ggtttagagaaagatactggcgcttctataaagttttccactccagcactacggtcaaaa
gaacgtgttgccaccatatcttcgcttgaaacactggagccattatactcgcctgcacaa
gttgccacaattcgagtgtttgaaagatctgtagatgttatccgtgaacatggatttatt
aaggatggctcaataagtgcaagaatcttagtcgggccgcgtgaaattaagtgcctcctc
gatgaaagaggaagattttcatcggatgtaggttctacaacgggggttgaagtacagcta
tttggtgcagagcacgctccgaactgtgctgaagagcatgacacagtggtgcagatcatt
ggcgagcatgataatgtgaagaatgccctttttcaacttactggtaagctgagggaaatg
gtcttttccagcttggtttctgaaggagcagcacctaaaaactattcaggttcttcgcac
tcccatggaggtcaacatgaatttggtattagtatgccttctcagtcgccagatcacttg
tccagcttttcttctcattaccaaacagatcaccttggttttgggccaaaacttggcggt
cctcatacaatgttacctgacaaacagtccaaggatagaaagaataccaagatgagcaag
ccgatcaaacaaagcatgagtagctggaagagttctcatggtgaaatcgagagtggaagg
atgcaggaggccggggcagcaaaaaaaaccgtcgtgaaaaatgtttcagaacaaaacttt
aattctgtttatggcgagaatggttctaatttgactcgactgaaagagatctctggagcc
gcagtcatcctacaaactcccggtcctggagaatgtgatggaaaagtgatcatatccggt
acacctgaacaaatccagatggcagagagccttcttcaagccttcatcctcgcgtaa
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