Capsicum annuum (peppers): 107852235
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Entry
107852235 CDS
T04646
Name
(RefSeq) general transcription factor IIF subunit 2-like isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107852235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107852235
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
107852235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Motif
Other DBs
NCBI-GeneID:
107852235
NCBI-ProteinID:
XP_016552774
UniProt:
A0A1U8FAP7
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All DBs
Position
4:complement(178622681..178624200)
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AA seq
273 aa
AA seq
DB search
MAEKINEKTNVQSVSMNSHLETRNADRRVWLMKCPSVVSRFFKQHQQSSSAADNDFSFIS
PGPVAKVTVVVDPLLANDATQFTMDLTGTSSKNMPTHYSMDMSTDFIPMSIFSESTQGRL
SVEGKIYHKFDMKPHHESIENYGKLCRERTNKYMTKNRQIQVIDNDNAKHMRPMPGYFTT
KASGSADKKKVSSKGLEMKRTRRDRDEMEEILFKLFERQSNWTLKQLIHETDQPEQFMKD
MLKLLCIYNNKGVHQGTYELKPEYKRSEDKDDS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaaattaacgaaaagaccaacgtgcagagtgtttcgatgaacagccatttg
gagacaagaaacgcagaccgacgtgtgtggttaatgaaatgtcctagcgttgtgtctcga
ttcttcaaacagcatcaacagtcttcttctgctgctgacaatgacttctcttttatttct
cctggacctgttgccaaagtgaccgtcgtcgttgatcctctccttgctaatgatgccact
cagtttaccatggacttgactggaacttcatctaaaaatatgcccactcactactccatg
gatatgtctacagattttattccaatgtctatattttctgagtcaacccaaggaagactt
tctgtggaaggaaagatatatcacaaatttgatatgaagccacatcatgaaagcattgag
aactatggaaaactttgtcgtgaaaggaccaataagtacatgacaaaaaatagacaaatt
caggttattgataatgataatgccaaacatatgaggcctatgccgggatattttacaact
aaagcttctggatctgcagataagaagaaggtgtcaagtaagggattagaaatgaaaaga
acaaggagggaccgtgatgaaatggaagaaatcctgttcaaactctttgagaggcaatca
aattggacactaaaacagctgatccatgagactgaccaacctgagcaatttatgaaagat
atgctcaaacttctctgcatctacaataataaaggtgttcatcaaggcacatacgagttg
aagccagagtacaagagatcagaagacaaggatgattcttga
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