Capsicum annuum (peppers): 107852272
Help
Entry
107852272 CDS
T04646
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
107852272
Spliceosome [BR:
cann03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107852272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
107852272
NCBI-ProteinID:
XP_016552816
LinkDB
All DBs
Position
3:168614468..168626332
Genome browser
AA seq
522 aa
AA seq
DB search
MLFDWVLIYLCSQVWHSASRISAILGCYLQVSYQEVRIQRAKGLGKKKKKKGSPVVHQTL
VPHHRSLSTSSPFPPFLKVIKMPDPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLR
AKNQALLQMQDVPSAVKALQFYSNVQPSIRGRNVYVQFSSHQELTTMDQNAQGRGDEPNR
ILLVTIHHMLYPITVDVLQQVFSPHGFVEKIVTFQKSAGFQALIQYQVQQSAVSARNSLQ
GRNIYDGCCQLDIQFSNLDELQVNLNNERSRDFTDPNPPSEQKGKSSQQRYGDMYPFQGS
GAHAGGFPQMGNTEAIAAAFAGGLPPGISGTNDRCTILVSNLNSDRINGDRLFNLCSLYG
NIVRIKILRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHANITTGPDTHD
YSNSNLNRFNRNAAKNYRYCCSPTKMIHLSSLPQDVTEAEIVAHLEEHGPIINSKLFEMN
GKQQALVLFEKEEQATEALVWKNATSLGSSTIRISFSQLQSI
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgttatttgattgggttttaatttatttgtgcagtcaagtgtggcacagtgccagtcgc
atctctgcaatcttggggtgttatctgcaagtttcttatcaagaagttcggatccaacgt
gcaaaagggcttggaaaaaaaaaaaaaaaaaaaggttccccagtcgtacatcaaacccta
gttccccatcaccgctctctctctacctcctccccctttcctccctttctgaaggtaata
aaaatgcctgatccttcaaaggtcattcatgttcgcaatgtgggccatgaaatctcggag
aatgacttgcttcaactattccaaccatttggcgtcattaccaaacttgtaatgcttagg
gcaaaaaatcaggccctcttgcaaatgcaagatgtcccttcagctgtaaaggcattgcaa
ttctactctaatgttcaacccagcataagggggaggaatgtttatgttcagttctcatct
caccaagaactgacaactatggatcaaaatgcacaaggccgtggagatgagcctaatcga
attctcttagtcacaatacatcacatgctataccctataaccgtggatgtgctgcagcaa
gtgttttctccacatggatttgtagagaagattgtcacatttcagaagtcggctggtttt
caagctttaatccagtatcaagtacaacagagtgctgtttctgcaaggaactcacttcag
ggacgtaatatatatgacggctgctgtcagcttgacatacagttctctaacctagatgaa
ttgcaagtgaacttaaataatgaacgttcaagggatttcactgacccaaatccaccatca
gaacagaaggggaaatcttctcaacaaagatatggagacatgtaccccttccaaggttct
ggagctcatgcaggtggatttcctcagatgggaaacactgaagcaattgcagctgcgttt
gctggtggtttgccacctggaattagtgggacaaatgacagatgtactattcttgtttct
aatttaaattcagatagaataaatggggacagactttttaatctgtgctccctttacggg
aatattgtcagaattaagattctgcgcaataagccagatcatgctctggttcagatgggt
gatgggttccaggcggagttggctgttcactttttgaagggtgccatgttatttggaaag
cgtctggaagtcaacttctcaaagcacgccaatattactacaggaccggacacacatgac
tactcaaattcaaatctcaaccgctttaaccgtaatgctgctaaaaactacagatactgc
tgctcccctaccaagatgatccacctatcctccttgccccaggatgtaacggaggcagag
attgtggcacatttggaggagcatggtcccattatcaatagtaagctttttgaaatgaat
ggaaaacagcaggctcttgttctttttgaaaaggaggagcaggcaactgaggccctcgta
tggaaaaatgctacatctcttggtagctcaaccatccggatttcattttctcagttacag
agcatatga
DBGET
integrated database retrieval system
