Capsicum annuum (peppers): 107853333
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Entry
107853333 CDS
T04646
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
cann
Capsicum annuum (peppers)
Pathway
cann04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107853333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107853333
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107853333
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_Zer-1
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
107853333
NCBI-ProteinID:
XP_016553821
UniProt:
A0A1U8F5B3
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Position
4:169708153..169712392
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AA seq
363 aa
AA seq
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MIEVEDLSFEKLMVENNSGGVCQMGGGGVIREWKDIPMELLLRIASLVDDRTVIVASGVC
SGWRDAISWGLTHLSLSWCKRNMNNLVLSLAPKFMKLQVLTLRQDLPQLEDNGVETIANH
CHELQDLDLSKSFKLTDRSLYALAHGCPNLTKLNISGCSAFSDGAVANLAERCRNLRVLN
LCGCVRAATDKALKAIGYYCNRMQTVNLGWCDKVGDEGVMSLAYGCPDLRALDLCGCVLI
TDESVIALANNCPHLRSLGLYFCQHITDRAMYSLAQSRVKNKHEMWASMKKHRYEDEGLM
NLNISQCTALTPPAVQAVCEAFPALHTCPERHSLIISGCLNLTSVHCACSVQAHRARVLH
PAH
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgatagaggtagaagacttgagttttgagaagctgatggtggaaaataacagtggtggg
gtatgtcaaatgggtggtggtggggtgataagagagtggaaagatataccgatggagttg
ttgttgaggattgcttcacttgtggatgatcggacggtgattgttgcttctggtgtctgt
agtggctggagagatgcaatttcttggggactcactcatctttccctttcttggtgcaag
aggaatatgaacaatttagtgctgtcacttgcgcccaagttcatgaagctacaggttcta
actcttagacaagatttaccacaactcgaggataatggtgtcgagacaattgccaatcac
tgtcatgaattgcaagaccttgatcttagcaagagctttaagcttactgatcgttccctt
tatgctttagctcacggctgtccaaacctcacgaagctgaatatcagtgggtgctctgct
ttcagtgatggtgcagttgcgaatctcgctgagcgttgccgaaacctgagagtcttaaac
ctttgtggttgtgttagagctgcaactgataaggcattgaaggctattggttattactgt
aaccgaatgcagactgtaaatctaggttggtgtgataaagttggtgatgaaggtgtaatg
agtttggcttatgggtgtcctgatctcagagcccttgatctctgtggctgtgtccttata
acagacgagagtgtgattgccttggcaaacaattgccctcacctgagatccctcggtcta
tacttctgccagcacatcacagacagggcaatgtactctctggctcagagtcgtgtcaag
aacaagcatgagatgtgggcgtctatgaagaagcacaggtatgaggacgaagggcttatg
aatctaaatatcagccagtgcactgctctcacacctcccgctgttcaggcagtgtgcgaa
gcatttcctgctctgcacacatgccctgaacgacattccctcatcattagcggctgcttg
aacttaacatcagtgcactgtgcatgctctgtccaagcacaccgtgcacgcgttctccat
ccagctcactga
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