KEGG   Capsicum annuum (peppers): 107853569
Entry
107853569         CDS       T04646                                 
Name
(RefSeq) PH-interacting protein isoform X1
  KO
K11797  PH-interacting protein
Organism
cann  Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:cann00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cann04121]
    107853569
Ubiquitin system [BR:cann04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107853569
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_SCAP Beta-prop_EML WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Bromodomain Beta-prop_SPT8 WDR90_beta-prop_4th VPS8_N Auxin_resp Beta-prop_HPS5
Other DBs
NCBI-GeneID: 107853569
NCBI-ProteinID: XP_047254617
LinkDB
Position
1:160602495..160640257
AA seq 1666 aa
MDSGKCASRNGVSLSSMAPTSFLNSVYSKSLFEEEERFAEHVTIKDVNIDLREVYFLIMH
FLSSGPCRKTFGIFCDELLEHELLPRRYHAWYSRKGVLCGDEDDDGSSFPLNYDDLVLRY
PHIEKNHLVKLLKQLLSSSPSLQCAGRGAPGAADVPTLLGSGPFSLLACERNRVNKQAQS
LPSYLRWPHMQANQVHGLTLREIGGGFPKHHRAPSIRLASYAVAKPATMVQKMQNIKKLR
GHRDAVYCAIFDRLGRYVITGSDDRLVKVWSMETGLCLASCRGHEGDITDLAVSSNNALV
ASASNDYSIRVWRLPDGLPISVLRGHTGAVTAIAFTPKTSSVYQLLSSSDDGTCRIWDAR
SSQCVPRVYSPRPKDNVSVRSSGTVATNIQSSSNTSHSHQILCCAYNANGTVFVTGSSDT
IARVWNACKFSPDHPDELNHEIDTLSGHENDVNYVQFSGCAVASRSSTSDSFGEDCIPKF
RNSWFSHDNIVTCSRDGSAIIWTPKPRKSSHGKHGRSWVKAYHLKVPPPPMPPQPPRGGP
RQRFRPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHAQSTYVLDVHP
FNPRIAMSAGYDGKTILWDIWEGIPIRTYDIGRFKLVDGKFSQDGTSIVLSDDVGQIYLL
NTGQGESQKDAKYDQFFLGDYRPLIQDVQGNVLDQETQLTPYRRNMQDLLCDASMLPYPE
PYQSMYQRRRLGALGTEWRPPSIKFSVGTDPGLGLGYQVLPVADLDIIAEPLPEFVDTLF
WEPDNGILNDETDSEYNMNEELSTEGEHECLRDGSSSGSVCSEEQKMRRSRKDSLRRSKR
KISVSEVEVASSGRRLRKKVKDEDVGTSCRSLRTRKSRNGKKATTKRKSTKPKSLRPHRG
AELPEIVHLHSDISSDDEDEASSEDDSLETESPECSSSDQRISSDDKMPSKQRSYPTVGA
IDVPPRSTEPPINGENKRRLVLKLKIRDASKVEPSKDTAVQCGDQADKPCSSQACEEIIE
DNVVNRRLKEPGSSYTDEIGMELFGECNKIEHMVNDKEPKNDLNEHVNREPSAGPDIQSL
ALADSLMDEAQTNLGQLEASTLLAGNGPGDLVCSSGAAKTSSLFHLSLSPNHQLQKIGVA
PGANKPTTADDNPEVNLKPRVKPNIIKIKSKKMSKESQARSEFNLPTDAYRVDESTSKIF
SHLEQNQVPETGNGPDRFSQNLHWGVLTDDTVGKNKSHGSRSSLRSSRDICESASNACND
HNETGSEFPHVATDAARRKRSLRFTAMSRDTALGKDDLKIRESRIAVGSSINTGKLTKKA
TGSPPLGWTSSNAFCRLSRDSKEGSSRDENVFSSGMSLNEAVKKLNWLLLSEHEEGYRYI
PQLGDEVVYFRQGHQEYIEYSDSSEPGPWTKNAAAVQAVEICLVKHLSYATLPGSGDSCC
KVTLQFIDTSSPVSGHKFKLTLPELVNFPDFLIERSRYEAAMERNWSYRDKCLVWWRDES
EQGGRWWDGQVVSVKAKSEQFPDSPWERCGVLYEGEVEPHPHSPWELHDVDSSWEQPQVD
LESRNRVLSSVTELLQSASRNQDKYGILKLKHVAVKLDFMNRFPVPLSPDIIQLRLENNY
YRSLKAMKHDFSVMIANGEAYFSKNRELSVKMKHLSEWFTKKLSNL
NT seq 5001 nt   +upstreamnt  +downstreamnt
atggattcagggaagtgtgcatcgagaaatggcgtttcattatcaagtatggcacctaca
agcttcctgaatagtgtatactcaaaatctctgttcgaagaagaggagagatttgctgaa
catgtcacaataaaggatgtaaatattgacctcagagaagtttattttctgattatgcat
tttttgtcatctgggccatgccgaaaaacgtttgggattttctgtgatgaacttctggaa
catgagcttctgcctaggagatatcatgcttggtattcaagaaaaggtgtactctgtgga
gatgaagatgacgatggcagttctttccctctaaattatgatgatctggtgctaaggtat
cctcatattgaaaaaaatcacttagtaaagttgctcaaacaactgctgagttcgagtcct
tctttgcaatgtgccgggagaggtgccccaggtgctgctgatgttcccacgctacttgga
tctgggcctttttctcttttggcttgtgagcgaaatagagtcaataagcaagcacaatcc
cttccttcatacctccgttggccacacatgcaggctaatcaggtgcatggtctaacttta
agagagattggaggtggtttcccaaaacatcatcgtgctccatctatccgtcttgcaagt
tatgctgttgcaaagccagcaactatggtccagaagatgcaaaacataaagaaactaagg
ggacatagggatgctgtttattgtgcaatatttgaccgcttgggaagatatgtgattact
ggttctgatgatcgccttgtcaaggtttggtcaatggaaactggattatgcctcgctagt
tgccgaggacatgaaggtgacatcactgatttagccgtcagttcaaacaatgctttggtg
gcatctgcatcaaatgattacagcattcgagtttggcgcttgccagatggattacctatt
tccgttttgcgtggtcacactggagctgttactgccatcgcatttactccaaagactagc
tccgtgtatcagcttctatcgtcatcagatgacggaacttgtcgcatttgggatgctagg
tcttctcagtgtgttccacgcgtttactcaccaaggccaaaggataacgtgtctgtgagg
agcagtggtactgttgcaaccaacattcagtcctcaagtaatacatcgcatagccatcaa
attttgtgttgtgcatacaatgccaatggaactgtctttgtcactggcagctctgatact
atagcaagggtctggaatgcttgtaaattctccccagatcaccccgacgagctaaatcat
gaaatagatacattatctggtcatgaaaatgatgtcaactatgtacagttcagtggctgt
gcagttgcttcacgatcttcaacttctgattcctttggggaggactgcattccaaaattt
aggaattcttggttcagccatgacaacatagtcacttgttcccgggatggaagtgcaatt
atttggacaccaaaaccacgcaagtcatcccatggaaaacatggacgttcttgggttaag
gcatatcatcttaaagttcctccgccaccaatgccacctcagcctcctcgaggagggcca
cggcagagatttcgccctactcctcgtggtgttaacatgatagtatggagtctggataat
cgctttgtactggctgctataatggattgccgaatttgtgtttggaatgctagcgatggt
agcttggtgcactccttgactggccacgcacagtctacatatgttctggatgttcatcct
ttcaaccccagaatcgcaatgagtgctggttatgatgggaaaaccatcctgtgggatata
tgggaggggatccccatccggacatatgatataggacgctttaagttggttgatggaaag
ttttcacaggatggaacatcaattgttctttctgatgatgttggacaaatatatttatta
aatacaggccaaggcgagtctcaaaaggatgctaaatatgatcagttcttccttggggat
taccggccccttatccaggatgtgcaggggaacgttcttgatcaggagacgcagctaact
ccatatcggaggaacatgcaagatctgctttgtgacgcaagtatgcttccatatcctgag
ccatatcagagtatgtaccagcgccgccgcctaggagctctgggtaccgagtggcgtcct
ccttcaattaagttttctgtcggcacggaccctggtttaggcctaggatatcaggtctta
ccagtggccgacttggacataatagctgaacctctgccggagtttgtggatacccttttc
tgggagccagataatggtattctgaatgatgaaactgattcagaatataatatgaatgaa
gagctttctactgaaggagagcacgaatgtttaagggacggctcttctagtggttcagta
tgtagtgaagaacagaagatgagaaggagtcggaaagatagcctacgcagatcaaaaagg
aaaatatctgtatcagaagtggaagtcgcatcatctggaagacgtcttaggaagaaagtt
aaggatgaagatgttggcacttcatgtagaagtcttagaactaggaaatccagaaatggg
aagaaagctaccactaaaaggaagtcaactaaaccaaagtcattaagacctcaccgagga
gctgaacttcctgaaattgtacatcttcattctgacatttcttcagatgatgaagatgaa
gctagctctgaagatgattcattggaaactgaatcaccagaatgttcgtcaagcgaccag
aggatttcatctgatgacaagatgccaagcaaacagcggagctatccaacagttggagct
atcgatgtgcctcctagatccactgaacctccaataaacggcgagaacaaaaggagatta
gtcctgaaattaaaaatccgtgatgctagtaaggttgagccatcaaaagacactgcagtt
cagtgtggtgaccaagctgataagccatgttcttctcaagcttgtgaagagataattgaa
gataatgtggttaaccgaaggttaaaggagccgggatcatcctatacagatgagattggc
atggaactgtttggggaatgcaataaaattgaacatatggttaatgacaaggaaccaaaa
aatgatttgaatgagcatgtcaatagagaaccatctgctggtccagatattcaaagtctg
gctctggctgatagtttaatggacgaggctcaaacgaatctgggacagttagaagctagc
acattgctggctggaaatggtccaggagatttagtatgttcctcaggagctgctaaaact
tcttcattatttcacttgtcattgtcacccaatcatcagctgcagaaaataggcgtcgct
cctggagcaaacaagcctactaccgctgacgacaatcctgaagtaaacctcaaacctaga
gtgaagccaaacataataaagataaaatcaaagaaaatgtctaaggagtctcaagctcgt
tctgagtttaatcttcctacagatgcttatcgtgtagatgaatcaacatctaaaatcttt
tcccatttagaacaaaaccaagtaccagaaacaggtaatggccctgatagattcagtcag
aatttgcattggggtgtactgacggatgataccgttggcaaaaacaagtctcatggatct
agaagcagtttacgtagcagtcgtgatatttgtgaaagtgcttctaatgcttgtaatgat
cataacgaaacaggttctgaattccctcatgtcgctactgatgcagcacgtagaaagaga
tccttgagatttactgcaatgtcaagagatacagcattagggaaagatgacctaaaaata
agagagagtcgtatagctgtaggttcatcaataaatacagggaagctaaccaagaaggcc
actggttctccaccattaggatggacttcaagtaatgcgttctgccggttatctagagac
agcaaagagggttcttccagggatgaaaatgttttttcatctggaatgagtttgaatgag
gcagtcaaaaaactgaattggttgctattgtcagagcatgaagagggttaccgctacatt
cctcagctaggtgatgaagtagtatacttccgacaggggcatcaagaatatatagaatac
agtgattcatcagagcctggtccttggacaaagaatgcagctgcagtccaagctgtggaa
atttgcttggtaaaacatctttcttatgcaactcttcctggctctggtgacagctgctgt
aaagttacacttcaattcatcgatacctcttcccccgtctctggacacaagtttaagctc
acgctgcctgaactagttaacttccctgactttctaattgagagatcaagatacgaggct
gccatggagagaaattggtcttacagagacaagtgtctggtttggtggagggatgagagt
gagcaaggtggtaggtggtgggacggtcaggtagtttctgtgaaagccaaatctgaacag
tttcctgacagtccatgggaaagatgtggtgtcctatacgaaggtgaagtagaaccccat
cctcatagtccctgggaactacatgatgtagatagttcatgggagcaacctcaagttgac
ctggaaagcagaaatagagttttgtcgtctgtcactgaactactgcagtcagcaagcaga
aatcaggataaatatggaattctaaaattgaaacatgttgctgtgaaactggacttcatg
aatagattccctgttccgctatcacctgatataatccagttaaggttagagaacaactac
tatagaagtttgaaagcaatgaagcatgatttttctgtgatgatagcaaatggcgaggct
tacttttccaaaaatagagagctttcagtgaaaatgaagcatctttcagaatggtttacc
aagaaattatcaaatttatga

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