Capsicum annuum (peppers): 107854126
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Entry
107854126 CDS
T04646
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00040
Pentose and glucuronate interconversions
cann01100
Metabolic pathways
Module
cann_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107854126
Enzymes [BR:
cann01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107854126
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
107854126
NCBI-ProteinID:
XP_047259658
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MELNIKISSAFILMLFLARLGEGQSPARAVFDVTKYGATPNGDISKAVMDAFKEACAATS
PSTIVIPKGTFPMNKVKLQGPCKAPLELQVQATLQAPPDPKQLTGEGEWFTINYLDHFTL
SGTGIFDGQGKAAWAQNDCAKSKNCHLPNNLSFNFLTNSTIQDITSKDSKMFHVNVNGCK
NLTFMRVKITAPPESINTDGIHVARSSNVNITDSVIGTGDDCISVGDELEQLYITRVTCG
PGHGISVGSLGKTPGEKPVVGVYVKNCTFINTDNGVRVKTWPASHEGVVTDLHYEDIIVQ
NVSNPIVIDQVYCPYNQCNKDLPSQVKISKVSINNIRGTSRTQDAVLLLCSKGVPCEGVE
VGDIDISYNGKEGPAKSNCENVKPTFVGKQNPPVCAGTLSA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaatatcaagatatcatctgcatttatattaatgttatttttagcacgactt
ggagagggccagtcaccagcccgagcagtgtttgatgttaccaaatatggcgcaacacct
aatggagatatcagcaaggcagtgatggatgcttttaaagaggcatgtgcagcaacaagc
ccaagtacaatagtgataccaaaaggaacatttccgatgaataaagtaaaattacaaggg
ccatgcaaggcacctttggagcttcaagtccaagccactttacaagctcctccagatcct
aaacaactcactggtgaaggtgaatggttcacaataaattatcttgatcatttcacactt
tctggaactggtatttttgatggccaaggtaaagctgcctgggctcagaatgattgtgcg
aaatccaagaattgccatcttcccaataatttgagcttcaacttccttacgaattccaca
atccaagacataacttcaaaagacagcaaaatgttccatgtcaatgtgaacggttgcaag
aatttgacatttatgcgagttaaaatcactgctccaccggaaagcatcaataccgatggc
atccacgttgcaagatcgagcaacgtgaacatcacggatagtgtaattggaacaggagat
gactgcatctctgtaggtgatgaattggaacagctatatatcactagagtcacttgtggc
cctggacatggtattagtgttggaagccttggaaagactcctggtgaaaagcccgtggtg
ggagtttatgtgaagaattgcacatttattaatactgacaatggtgttagggtgaagaca
tggccagcttcacatgaaggtgttgtcacggatttgcactatgaagatatcattgtgcaa
aatgttagcaaccctattgtcattgatcaagtctattgcccatacaatcaatgcaacaaa
gatttgccatcacaagtgaagataagcaaagtgagcataaataacataaggggaacttca
agaacacaagatgcagtgcttctactgtgcagtaaaggagtaccatgtgaaggagtggaa
gttggagacatagacatttcctacaatggaaaggaaggaccagcaaagtctaattgtgag
aatgtcaagcctacttttgtagggaagcagaatccacctgtttgtgctggaactctatct
gcttga
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