KEGG   Capsicum annuum (peppers): 107854547
Entry
107854547         CDS       T04646                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107854547
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cann03019]
    107854547
   03041 Spliceosome [BR:cann03041]
    107854547
Messenger RNA biogenesis [BR:cann03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107854547
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107854547
Spliceosome [BR:cann03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107854547
SSDB
Motif
Pfam: RRM_1 RRM_7 Paf1 DUF4604
Other DBs
NCBI-GeneID: 107854547
NCBI-ProteinID: XP_016555044
LinkDB
Position
10:215654845..215661338
AA seq 426 aa
MGTKRKASSSTPKPQPVPQKPQSSSSEEEQEEEEQVEYEEEEEVEYEEVEEEEEEEEEEE
EEEEETEPEPEPESESIKQETIRKLLEPFSKEQIISLFKTGSSDDPSILSRVKTLADSDP
THRKIFVHGLGYDATSEQLLSAFKPYGEIEECKLITDKVTGRAKGYGFVLFKSRVGSKRA
LKEPQKRIGNRMTSCQLAAVGSSGGNQDSGSGGRKIYVGNVGADLESEKLRAFFAKFGEI
EEGPLGIDGVSGKFKGFAIFVYKTVEGANKALEVPQKLFDGCQLFCKKFVENSTNAGGGS
SSNVNQGVQQNEISYGYGVSPGILGGANMNGVPILMGQGVGFGMNPLLGFNPSFGGIGSG
YGINGISPVVVGGYGSDPALQGLGTYPGAQIWQPSYGGSSAMATITTGTKESSGVGSVTY
PSSRGR
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgggaactaagcgaaaagcttcttcttcaaccccaaagccccaacctgtaccacaaaaa
cctcaatcttcatcctctgaagaagaacaagaagaagaagagcaagtcgaatacgaagaa
gaagaagaagtagaatacgaagaagtagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaaaccgaaccggaacccgaacccgaatccgagtcgataaagcaagaa
accatccgtaaacttcttgaaccattcagcaaagaacaaataatcagtttgttcaaaacc
gggtcatcagacgacccatcaattctttctcgggtcaaaaccctagctgattctgacccg
acccaccgaaaaatcttcgtacacggactcgggtacgatgcaacatcggagcaactcctt
tccgctttcaaaccctatggagaaatcgaagaatgtaagttaattactgataaggtaacc
ggaagagcaaaagggtacggatttgtgctgttcaaatctcgggtcgggtcaaaaagggct
ttaaaggaaccccagaagagaattgggaatcgaatgacgtcctgccagctggcagctgtg
gggtccagtggggggaatcaagattctgggtccggtggccggaaaatatatgttgggaat
gttggggctgatctggagagtgaaaagttaagagcttttttcgcaaagtttggggagatt
gaagaagggccattagggattgatggtgttagtgggaagtttaaagggtttgctatattc
gtgtataagacggttgagggagcgaataaggcgttggaggtaccacagaagttgtttgat
gggtgtcaattgttttgcaagaagttcgtggagaattcgaccaatgctggtggtggtagt
agtagtaatgtgaatcagggtgtgcagcaaaatgagattagttatggttatggagtgagt
ccggggatactaggtggcgcgaatatgaatggggtgcctattttgatggggcaaggcgtt
ggatttggaatgaatccgttgttgggattcaatccttcatttggagggattggttctggt
tatggtataaatggcattagtccggttgttgtaggaggttatggttcggacccagctttg
caaggattagggacttatccgggtgcgcagatatggcaaccgtcttatggagggtcatca
gctatggcaacgataactacaggtacaaaagagtcatctggcgttggatcagtgacctat
ccctcgtcccggggccgttag

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