Capsicum annuum (peppers): 107855400
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Entry
107855400 CDS
T04646
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cann03400
]
107855400
Enzymes [BR:
cann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107855400
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
107855400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
AAA_19
DEXQc_Suv3
T2SSE
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
107855400
NCBI-ProteinID:
XP_016555888
LinkDB
All DBs
Position
6:209265410..209309911
Genome browser
AA seq
2088 aa
AA seq
DB search
MLFESPRLTNALREPFDADQAYLHRKTILQNLNSRSSATSLEESELARKIVYKWDQASPE
LRQAYKQFISAVVELMKGEIVSEEFREVAFSVYRLFSGTMVEGEEHRLIAEKKLDLQKLV
GYAVSDSLLSRIASLAQRLYELQNYHPGIETAPLPEMSNGTTDEVEFGSDLVFRPPARFL
IDVSLEDSDFSVEQDSAASSSHESQYDHGAFSNYRESVSGGKFDLSWVRDACDKIVGGST
SQLPRDELAMAICRVLDSEKPGDEIAGDLLDLVGDGAFETVQDLIMHRKEIVDAIHHGLI
ELKADKMTTGGQLRAPSYAIQVTVQTESERQIDKLRRKEERKHRRGTNNGVEGDLSTVSF
SSLLHASEKKNIFEDLIGHGEGPNTLGPTALPQGTTRKHYKGYEEVIIPPTSTASMMPGE
RLIEIKELDDFAQAAFHGYKSLNRIQSRIYHTTYNSNENILVCAPTGAGKTNIAMIAILH
EIKHHFRDGYLHKDEFKIIYVAPMKALAAEVTSTFSRRLSPLNVTVRELTGDMQLSKNEL
EETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVE
STQSMIRIVGLSATLPNYLEVAQFLRVNSETGLFFFDSSYRPVPLAQQYIGISEHNFLAR
NDLLNEICYNKVVDSLKQGHQAMVFVHSRKDTVKTADKLVELAGKNEECELFRNDEHPQY
DLIKREVIKSRNREVVQLFECGIGIHHAGMLRADRNLTERLFSQGLLKVLVCTATLAWGV
NLPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYY
LRLLTSQLPIESQFINSLKDNLNAEVVLGTVTNVKEACAWLGYTYLFIRMKMNPLAYGIG
WDEVMADPSLTLKQRDLISDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYTSVE
TYNEMLSRHMNESELINMVAHSSEFENIVVRDEEQNELETLARTYCPLEVKGGPSTKYGK
VSILIQLYISRGSIDMFSLISDAAYISASLARIMRALFEICLRRGWCEMSALMLDYCKAV
DRRIWPHQHPLRQFDKDISSEILRKLEERGADLDHLHELQEKDIGALIRYAPGGKVVKQC
LGYFPSVLLSATVSPITRTVLKVDLVIAPQFVWKDRIHGTALRWWILVEDSENDHIYHSE
LFTLTKKMARADPQKLSFAVPIFEPHPPMYYIRAVSDSWLQADALYTITLHNLALPEVQT
SHTELLDLKPLPVTALGNGTFEALYKFSHFNPIQTQAFHVLYHTDKNILLGAPTGSGKTI
SAELAMLHLFNTQPDMKVIYIAPLKAIVRERMTDWRKRLVSQLGKKMVEMTGDYTPDLMA
LLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYIS
SQTERRVRFVGLSTALANAHNLADWLGVDETGLFNFKPSVRPVPLEVHIQGYPGKFYCPR
MNSMNKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFISMPEDSLQ
MVLSQVTDQNLKHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPA
HLVVIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFL
YEPFPVESSLREQLHDHINAEIVTGTISHKEDAVHYLTWTYLFRRLMVNPAYYGLEHAEP
GILNSYLSSLVQSTFEDLEDSGCIKITEDNVEPLMLGSIASQYYLKYTTVSMFGSKIGPD
TSLEVFLQILSGASEYDELPLRHNEENYNEKLAEKVPYAVDHSRLDDPHVKANLLFQAHF
SQSELPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSTITCMHLLQMVMQGLWFDRD
SPLWMLPCMTDDLLSSLHKKGIASIQQLLDCPSESLRVITGSSAASRLYQDMRHFPQIQV
RLRIHKKESSGSEIFTLNIRLEDANTQRRTAKAFIPRYPKVKDEAWWLVLCNPSASELYA
LKRASFSGRLQTHMDLPSTLTNFQGIKLILVSDSYIGFEQEHSIEGLA
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttgaatcgcctcggcttaccaatgctctcagagaaccattcgacgccgatcaa
gcttaccttcaccgcaaaaccattctacaaaatctcaactctcgcagtagtgcaacttca
cttgaagaatcagaacttgctcgaaagattgtctataaatgggaccaagcttctcctgag
ttgcggcaagcatataagcagtttattagcgcggtggttgagttgatgaagggtgagata
gtgtcagaggagtttagggaggtggcattcagtgtgtataggcttttcagtgggacaatg
gtggagggtgaggaacacaggcttattgctgagaagaagctagatttgcaaaaacttgtt
ggctatgcagtttcagattcattactatcaagaattgcctctttagcacaaagattgtat
gaattgcagaattatcaccctggaattgagaccgcccctttaccagaaatgtctaatgga
accactgatgaagtggagtttggatcggaccttgtgttcagaccgccagctcgtttctta
attgatgtttcattggaagattcagatttttctgttgagcaggatagtgcagcttcttca
agtcacgaatcacagtatgatcatggcgccttctcaaattatagagaatctgtatctggt
ggaaaatttgatttaagctgggtaagagatgcctgtgataagatagttggaggaagtact
tcacagcttcctcgagatgaactggcaatggccatatgccgcgtacttgattctgagaaa
ccaggggatgagatagctggcgatttgcttgaccttgttggtgatggtgcatttgaaaca
gttcaggatcttatcatgcacagaaaggaaattgttgatgcaatccatcatggactaatt
gaactgaaagctgacaagatgactacaggcgggcaattgcgtgctcctagttatgccatc
caggtaactgttcaaactgagtctgaaaggcaaattgataaacttcgtcgcaaggaagaa
aggaagcatagacgtggaacaaataacggggttgagggtgatttgtccactgtgagtttt
agttctttgcttcatgcgagtgagaagaaaaacatatttgaggacctcattggtcatggt
gaagggccaaacaccttaggtcctacagcccttcctcaaggaactaccagaaagcactac
aaaggatatgaagaagtcattatccctccaacatcaactgcatctatgatgcctggggag
agactgattgagataaaggagctagacgattttgctcaagcagctttccatggctacaag
agtctcaaccgtattcagagcagaatttaccatactacttataatagcaatgaaaacata
ctagtatgtgctcccactggggctgggaaaacaaacattgctatgattgctattttacat
gagatcaaacatcactttagagatggttacttacataaggatgaattcaagataatctat
gttgctcctatgaaggcattagctgcagaggtcacatcaactttcagtcgccgattgtct
ccacttaatgtaactgtgcgggaacttactggagacatgcagctttctaagaatgagctc
gaggaaacgcagatgatagtgacaacacctgaaaagtgggatgttattactcgtaaaagc
agtgatatgtcactctcaatgctggtcaagctacttatcattgatgaagtccatttgcta
aatgatgatagaggtcctgtgatagaagcgttagtagcccgtacacttcgtcaggtggag
tccacacagtctatgataaggatagtgggcctttcagctactttacctaactacttggag
gttgcacagtttctaagggtgaattcagagacaggcttatttttcttcgattcgagctac
cgcccagtacctcttgcgcagcagtatattggtattagtgagcataactttttagcccgt
aatgatctgcttaatgagatatgttacaataaggttgttgattccttaaaacaagggcat
caggctatggtttttgtccattcacgtaaggacacagtgaaaactgctgataagctggtt
gagttggctggtaaaaatgaagagtgtgagctgttcagaaatgacgagcatcctcaatac
gatcttataaagagggaagttatcaagtccagaaatagggaggtcgtccagctgtttgaa
tgtgggattggcattcatcatgctggaatgttacgtgctgacagaaacctaacagaaaga
cttttctctcagggacttttgaaggtccttgtttgcacagcaactttggcatggggagtc
aatttgcctgctcacacagttgtgattaagggaactcaaatatatgatccaaaggctggt
ggatggcgagatctgggtatgctagatgttatgcaaatcttcggacgtgccggaagacct
cagtttgataaaagtggtgaaggcattataatcacttcacacgacaagttggcatattat
ttacgtctattgacaagtcaacttcctatagaaagtcagtttatcaattccttgaaagat
aatctaaatgctgaggtggtactgggtactgtcacaaatgttaaggaagcttgtgcttgg
cttggttacacttatcttttcattaggatgaagatgaatcctttggcctatggcatcgga
tgggatgaggtcatggcagatccatcattaaccttaaagcaaagagatcttataagcgat
gctgcccgtgcacttgacaaagcaaaaatgatgcgttttgatgagaaaagtgggaacttc
tattgcactgaacttggtcgtattgcaagtcacttttatatccagtatactagcgttgaa
acttacaacgaaatgctgtcacgccatatgaatgaaagcgagttgataaatatggtagct
cattcttctgaattcgaaaatattgtggtccgagatgaggaacaaaatgagcttgagacg
ttggctcgaacatattgtccattggaagtcaagggtggtccatctaccaaatatggaaaa
gtttcaattcttatccagctgtacatctctcgaggatcaattgacatgttttcactgatc
tctgatgcggcttatataagtgcaagcttggctcgtattatgcgggctctttttgagatt
tgtctgcgtagagggtggtgtgaaatgtctgctcttatgttagactattgcaaggctgtg
gatcgccgaatatggccccatcaacatcctcttagacagtttgacaaggacatttcttca
gaaatattgaggaagcttgaagaaaggggagcagatttggatcatttacatgagttgcaa
gagaaagatattggagctttgattcgttacgcacctggaggaaaggttgtcaagcaatgt
ctgggatattttccatcagtcttgttgtctgctacagtcagtccgatcactagaacggtt
ctgaaggtggatttggtcatagctccacagtttgtttggaaggatcgaattcatggcact
gcgctgcgctggtggattctggttgaggattctgagaatgaccacatttaccattccgag
ctcttcacactcacaaagaagatggcgagagcagatccacagaaactatcctttgctgtg
ccaatctttgagccacatcctccgatgtactacattcgtgctgtttctgactcatggctg
caagcagatgctttatatactataactctccacaatctcgctcttccagaggtccaaaca
tcccacactgagcttctagatttaaaaccccttcctgtgactgcactcgggaatggaact
tttgaggccttgtataaattttcacacttcaatcctatacaaacacaggcttttcatgtg
ctgtatcacacggacaaaaatatcctcttgggagctccgactggaagtgggaagacaata
tcagctgaacttgctatgctccatttgtttaatacacagcccgatatgaaggttatctat
atagcacctttaaaggctattgttcgggagaggatgacggactggagaaagcgtcttgtt
tcccaacttggaaagaagatggttgaaatgactggtgactacaccccggatctaatggct
ctcttgtcagcagacatcataatctcgactcctgaaaagtgggatggcatcagtcgcaat
tggcacagtcgaagctatgttactaaggttgggcttatgattttggatgaaattcattta
cttggagctgatcgaggacccatacttgaggttatagtctcaaggatgagatacatatct
tctcaaacagagcggcgagttcggtttgttggcctgtcgacagcattagccaatgcgcat
aatttggctgattggttgggtgtcgatgaaactggcctctttaatttcaaaccaagtgtg
aggcctgttcctcttgaagttcatattcagggatatcctgggaagttttactgcccaagg
atgaatagcatgaacaagcccacatatgctgctatatgtacccattcaccaacaaaacca
gttctaatctttgtctcatctcgtcgccaaacaaggcttacggccctggaccttattcag
tttgcagcttcagatgagcacccgaggcagttcataagcatgccagaagattcgcttcag
atggttctttctcaagtcacggaccagaacttgaagcacaccttacaatttggaattgga
ttacaccatgccgggctgaatgacaaagaccgatcattggtggaggaactgtttgcaaac
aacaagatccaggtgttggtttgtacaagtacgttagcatggggtgtaaatcttcctgca
catctggttgttattaagggaacagagtattatgatgggaaggcaaaaaggtatgttgat
ttcccaatcaccgatatattacaaatgatgggtcgagctggtcgtccacaatatgatcaa
cacgggaaagctgttattcttgttcatgaacctaagaagagcttttataaaaagtttctt
tatgaaccattcccagttgaaagtagcctgagagagcaactgcatgaccacatcaacgct
gagattgttacaggaacaatctctcataaagaggatgcagtgcattatctcacttggacc
tacttgtttcgtagattgatggttaacccagcttattatggcctagagcatgcagaacct
gggattttgaattcttatttgtctagcttggtgcaaagtacatttgaggatctagaagac
agtggatgcatcaagattactgaggacaatgtcgaaccactgatgttgggctcaatagca
tctcagtattatctcaagtacaccactgtatctatgtttggctcaaaaataggacctgat
acatcgcttgaggttttcctacaaatattgtctggtgcttctgaatacgatgagcttccg
ctgaggcataatgaggaaaactacaacgaaaaattagctgagaaagttccatatgctgtt
gaccacagtcgcctggatgatcctcatgtgaaagcaaatctgctctttcaggctcatttt
tcccaatcagagctgccaatcagcgattatgtcacagacttaaagtctgtgctggatcaa
agtatacgtattatccaggctatgatagatatttgtgccaacagtggatggctctcgagt
accattacctgcatgcatctgttgcaaatggtcatgcagggcttgtggtttgatagggac
tctcctctctggatgctaccatgcatgactgatgatctactcagctcattgcataaaaaa
ggaattgctagtatccagcagctgttggattgtccttcagaatctttgcgggttatcacc
gggagttcagctgcctcgagactctatcaggatatgcggcatttccctcagattcaagtt
cgacttagaattcacaaaaaggaatctagtggtagtgagatttttaccttgaacattaga
ttggaagatgcaaatactcagcgaagaacagctaaagcttttatcccacgatatccaaag
gtaaaagatgaagcttggtggttagtcctttgtaatccttctgcgagtgaactgtatgct
ttgaagagagcgtctttctctggtcgtctgcaaacgcatatggatttgccatccacgctg
accaatttccaggggataaagctcattctcgtatcggattcttatattgggtttgaacaa
gagcactcgattgaaggattggcttaa
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integrated database retrieval system
