Capsicum annuum (peppers): 107855417
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Entry
107855417 CDS
T04646
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03015
mRNA surveillance pathway
cann04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107855417
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107855417
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cann01009
]
107855417
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107855417
03036 Chromosome and associated proteins [BR:
cann03036
]
107855417
Protein phosphatases and associated proteins [BR:
cann01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107855417
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107855417
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107855417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EF3_N
HEAT_EZ
Htt_N-HEAT_1
PDS5
SCD
Adaptin_N
CLASP_N
Cnd1
INTS7_N
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
107855417
NCBI-ProteinID:
XP_016555914
UniProt:
A0A1U8FHX3
LinkDB
All DBs
Position
6:208526350..208537783
Genome browser
AA seq
581 aa
AA seq
DB search
MSAIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGMFIPYVGGVEHARVLLPPLEGLCSVEETCVREKAVESLCRIGSQMKES
DLVESFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEPVKNELRTIYSQLCQDDMPMVR
RAAATNLGKFAATIEQPYLKTDIMSMFETLTQDDQDSVRLLAVEDCAALGKLLEPKDCVA
QILPVIVSFAQDKSWRVRYMVANQLYELCEAVGPEATRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPTWAMEHIIPQV
LDMINDPHYLYRMTILHAISLLAPVMGSEITCSKLLPVIVAASKDRVPNIKFNVAKVLQS
VIPIVGQSVVENTIRPCLVELSEDPDVDVRFFANQALQATK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaattgatgagccattgtatcctattgcggttttgattgatgagttgaagaac
gaagacatccagcttagattgaattcaatccggcgattgtctaccatagcccgtgctctt
ggtgaggagagaactcggaaagagttgattccatttctaagtgagaacaatgatgacgat
gatgaggtccttcttgcaatggccgaagagttgggcatgtttattccatatgtaggaggg
gttgaacatgcacgtgtattgcttccacccttggaaggtctttgtagtgttgaagagact
tgtgttagggaaaaggcagttgagtcattatgcagaattgggtctcaaatgaaggaatcg
gacttggtggaatcatttattcctcttgtgaagagactggctgctggagagtggtttact
gctcgagtttcgtcctgtggattgtttcacatagcatatcctagtgctccagagccagta
aagaatgaactgagaaccatctatagccaactttgccaagatgatatgcctatggtgagg
agagcagctgctacaaatcttggaaagtttgctgcgactattgaacaaccctatttgaag
actgacatcatgtcaatgtttgagaccctgacacaggatgatcaagattctgtccgttta
ttggctgttgaggattgtgctgctttggggaagctgctggagcctaaagactgtgtagca
caaattcttcctgtcatagttagttttgcgcaggataagtcttggcgtgttcgttacatg
gttgcaaatcaactttatgaactttgtgaggcagtcggaccagaggctaccaggacggat
ttggtccctgcctatgttcgtttacttcgtgataatgaggctgaagtgcgcatagctgct
gctggcaaggtgactaagttctgtcgtatattgagccctgagcttgctatccagcatatc
cttccatgtgtaaaggaactatcatcagattcatcccagcatgttcgttctgctttggct
tcagttatcatgggaatggctcctattttaggaaaggatgcaactatcgagcagcttctc
ccaattttcctctctcttctgaaggatgagtttcctgatgttcgtttgaatattatcagt
aagcttgatcaagtaaaccaggtaattggaattgatttgctctcccaatcactgctgcca
gctattgttgaacttgctgaggatagacattggagggttcggcttgcaataattgagtac
atacctctattggcaagtcagctgggggtcggcttttttgatgacaagcttggtgctctc
tgcatgcaatggctaaaagataaggtttactctattagagatgcagcagcaaacaatgtt
aagcgtcttgctgaggaatttggtccaacatgggcaatggagcatataattccacaggtg
ttggatatgattaatgacccacattatctttaccgaatgaccatccttcatgcaatttct
cttcttgcccctgtaatgggctcagaaattacttgctccaaacttctgccggttatagtt
gctgcatcgaaagacagggtacccaatatcaagttcaatgtggctaaggtgttgcagtct
gttattccaatagttggacaatctgttgtggagaacacaattcgaccgtgtttggttgaa
ctcagcgaggacccagatgttgatgttaggtttttcgccaaccaagccctacaagcaacc
aagtga
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