KEGG   Capsicum annuum (peppers): 107855560
Entry
107855560         CDS       T04646                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03020  RNA polymerase
cann03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107855560
  09124 Replication and repair
   03420 Nucleotide excision repair
    107855560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cann03021]
    107855560
   03400 DNA repair and recombination proteins [BR:cann03400]
    107855560
Transcription machinery [BR:cann03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     107855560
DNA repair and recombination proteins [BR:cann03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107855560
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Ogr_Delta Zn_ribbon_4 Zn_ribbon_RPAB4 Zn_ribbon_recom
Other DBs
NCBI-GeneID: 107855560
NCBI-ProteinID: XP_047258930
LinkDB
Position
Unknown
AA seq 114 aa
MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEPAENNCVYRNEIHHSAAERTQVLQ
DVAADPTLPRTKSVRCSQCGHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtactatgaaattttgccgagaatgtaacaatattttgtaccccaaagaagacaag
gagcaaaagatcctcctttatgcttgcagaaactgtgaccatcaggagcctgctgaaaac
aattgtgtgtatagaaatgagatacaccattctgctgcagaacgcacacaagtattgcag
gatgtagcagcagatccaactttgcctcgtacaaaatctgttcgttgttctcaatgtggt
catggagaagcagttttcttccaggcaactgcaaggggagaagaaggtatgacactgttc
tttgtttgctgcaacccgaactgtggccacaggtggagggattga

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