Capsicum annuum (peppers): 107855735
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Entry
107855735 CDS
T04646
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107855735
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107855735
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
107855735
NCBI-ProteinID:
XP_047267009
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Position
4:complement(216795663..216800548)
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AA seq
652 aa
AA seq
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MSEPKQKHSQISTPLLQLLQQEDQVVIDNGMFQLTLTNPGGKIIGIQYNGIENLLELKNP
VLNGGFWDLNWSVPGTVGTRGKFDEIEGNSFKVIVETEEQIELSFTRTWDPSLQDEYSPL
TIDIRFIILQDSPGFYSYAIYEHKEDMPAFNLNETRIAFMLSVEKFRYMAMADDRQRVLP
LPVDREPPRGKELAYPEAVLLVDPVEPEFKGEVDDKYQYSCENKDNKVHGFICLAPPVGF
WQITPSNEFRTGGPIKQDLTSHVNPTTLAMFVSTHYGGQDFVIPFGTGEPWKKVFGPVFI
YLNSVEDKNDTLSLWDDAKERMHKEVNCWPYSFPSSEDFPKDDQRGAIRGRLVVSDRYIS
KEHLPARGAFVGLAPPGDAGSFQTECKGYQFWTNSDDEGYFSIQNVRPGDYNLYAWVPGF
IGDYKYEKPIAITAASDVDTGELVYAPLRSGPTLWEIGIPDRSAAEFYVPDPNPQYINKL
FVNQPANSFRQYGLWERYADLYPDQDLVFTVGSSDYKKDWFYAQVTRKVGDNAYKPTTWQ
IKFNLESIDQTGSYTLRIALSSATFSVLEVRVNEEETNPPHFSSGLIGSDNTIARHGVHG
LYWLFNVEVAAGQLLQGENIIYLKQARSVSALHGIMYDYIRLEAPPLSAAHY
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagccaaagcaaaagcattcacaaatatcaactccacttctgcagcttcttcag
caggaggaccaagtagtaatagataatggcatgttccaactcacattgacaaatccagga
ggaaaaatcattggtattcaatataacgggatcgaaaatctgctggagctcaaaaaccca
gtcttgaatggcgggttctgggacttaaactggagtgtacctggaactgttggaacgaga
ggaaaatttgatgagattgaaggtaatagttttaaagttatagtggaaactgaagaacaa
atagagctctcatttacaaggacatgggatccttcacttcaggacgagtattccccgtta
accatagacataaggttcataattcttcaagattcgcctggtttttactcatatgctatc
tatgaacacaaagaggatatgccagcattcaacctcaatgaaaccaggatagctttcatg
ctcagcgtcgaaaagtttcggtacatggctatggcagatgataggcaaagagtactgccc
ctccctgtagatcgcgaacctccaagagggaaggaattggcatatccagaagctgttctg
ctggttgatcctgtggagccagaatttaaaggagaagttgatgacaagtatcaatattcg
tgtgagaacaaagataacaaagtccacggcttcatttgcttagctcctcctgttggattc
tggcaaattactccaagcaacgagttcagaactggaggacctatcaagcaggatcttact
tcccatgttaatccaacaactctggctatgttcgtgagcactcattatggagggcaggat
ttcgtgattccatttggaacaggtgaaccatggaagaaagtttttggacctgtttttata
tatctcaattctgtagaagacaagaatgatacactttccctttgggatgatgcaaaagaa
cggatgcacaaggaagttaactgttggccttatagtttcccaagctcagaagattttcca
aaagatgatcaacggggtgccatccgtggtagattagtagtcagtgacaggtatataagt
aaggagcatttacctgcaaggggtgcttttgtggggctagctccacctggagatgctgga
tcattccaaacagaatgcaagggctaccaattctggacgaactcggatgatgaaggatat
ttctcaatccaaaatgttcgtcctggggactataacctctatgcatgggtacctggcttc
attggagattacaaatatgaaaaacccatagcaattactgcagcttctgatgttgatacc
ggtgaacttgtatacgcgcctctgaggagcggtcctacattgtgggaaattggtatccct
gatcgttctgccgcagaattctatgttcctgaccctaatccacaatatatcaacaaactt
ttcgtaaatcaaccagcaaacagctttagacagtatggattatgggagagatatgcagat
ttatatccagatcaagatttggtatttacagttggaagtagtgactataaaaaagattgg
ttctatgctcaggtgacaagaaaagttggtgataatgcatataaacctacaacatggcaa
attaaattcaatttagaaagcattgatcagactggaagttacacattgcgtattgcgctc
tcatctgcaactttctctgtattggaggtaagggtgaatgaggaagaaacaaatccacca
catttctcaagtggactgattggaagtgataatacaattgctagacatggagtccatggg
ctgtattggttgttcaatgtggaggtagctgcaggccaactccttcaaggagagaatatc
atatatctcaaacaagcgcggagtgtcagtgctctccacgggattatgtatgactatatt
cgtctggaagctcctcctctttccgctgctcattattaa
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