Capsicum annuum (peppers): 107855738
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Entry
107855738 CDS
T04646
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107855738
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107855738
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
107855738
NCBI-ProteinID:
XP_016556232
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All DBs
Position
4:complement(216837323..216846572)
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AA seq
670 aa
AA seq
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MGYGRSVKRMMKCLLCACDGQIGACCHSGCPGTMSPIGVRLYIQDRHVMMDNGLVQVTLS
NPDGIVTGIRYNDIDNLLEGLNDESNRGYWDVVWNSPDGGKSGVFEVIKGTDFKVIKETD
DQVEISFSRPWDPSLQGKLVPLNIDKRFILLRGCSGFYSYAIYEHVGSPEWPAFSIGETR
IAFKLRKDKFHYMAVADNRQRFMPLPDDRMPARCQRLAFAEAVFLSNPVEPELRGEVDDK
YQYSCDNKDNKVHGWISMDPPVGFWQITPSDEFRSGGPVKQNLTSHVGPTTLAMFLSSHY
AGDDLTPNFAQGEAWRKVFGPVFIYVNSVMPGEDPVALWDDAKIQMQHEVQSWPYSFPAS
EDFPSADQRGNVSGRLLVQDKYISDDHIPANGAYVGLAPPGEAGSWQRECKNYQFWAKSD
DNGYFSINNIRVGDYNLYAWVPGFIGDYLYETPISITPGCNIDVDEIVYQPPRDGPTLWE
IGIPDRTAAEFFVPEPNPKFINKLFVNHPDKFRQYGLWDRYSELYPKDDLVYVAGESNYS
KDWFFAQVPRRKEDGSYQGTTWQIRFKLDSVNQGGTYKLRIAIASATLAEVQVRVNNPST
NRPLFTTGLIGRDNSIARHGIHGLYWLYIIDIQGNQLVQGDNTIYLGQPRNQSPFQGIMY
DYIRLEAPPN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgggttatgggcgtagtgtcaaacgcatgatgaaatgcttattatgcgcgtgtgatgga
caaataggagcttgttgtcatagtggatgtcctggaacaatgtccccaattggagtgaga
ttgtacattcaggatcgccatgtgatgatggataatggcctagtccaagtcactttatca
aatccagatggaatcgtcactggaatacgctataatgacattgataatctacttgaaggc
cttaacgatgaatcaaatagagggtattgggacgtcgtctggaattctcccgatggtgga
aaaagtggagtattcgaagtgatcaagggtactgatttcaaggttataaaggagacagat
gatcaagtagagatatcattttcacgaccatgggatccctctctccaaggcaaacttgtt
ccgctaaatattgacaaaaggtttattttgctccgtggctgctctggtttctactcttat
gccatttatgagcatgttggttcacctgagtggcctgcttttagcatcggtgaaactaga
atagcattcaagctccggaaagataagtttcactacatggctgtggcagacaataggcaa
agattcatgcctctaccagatgaccgaatgcctgcaagatgccaacgccttgcctttgca
gaagcggtctttctgagcaatcctgtggagccagagttaagaggagaggtcgatgacaaa
taccagtattcatgtgataacaaggacaacaaggtccacggctggatatctatggatcca
ccagtgggattctggcaaattactccgagtgatgaatttcgatctggtggacctgtcaaa
cagaacctcacatcccatgttggtccaactaccttagctatgtttctaagctctcattac
gctggggatgatctgacaccaaattttgctcaaggagaagcctggaggaaagtttttggc
cccgtgtttatatatgttaattctgttatgcctggggaagatcctgttgctctatgggat
gatgccaagatacagatgcagcatgaagttcaaagctggccttacagttttccagcttca
gaagattttccatcagcagatcaaaggggcaatgttagtggtagacttttggttcaagac
aagtacattagtgatgatcatatacctgcaaatggcgcttatgtcggccttgctccacca
ggagaagctggctcctggcaaagagaatgcaagaactaccaattttgggctaaatcagac
gataatggatacttctccataaacaatatacgtgttggtgactacaatctttatgcatgg
gtacctggattcattggggactatctatatgagactcccatttccataactccaggttgt
aatattgacgtggacgaaattgtatatcagcctccaagagacggccccacattatgggaa
ataggcattcccgatcgtactgctgcagaattttttgttcctgaacccaatccaaaattt
attaacaagcttttcgtcaatcatcctgacaagtttaggcaatacggattgtgggatagg
tactctgagttatatccaaaggatgaccttgtgtatgtagctggagaaagtaactatagc
aaagactggtttttcgctcaggttccaaggagaaaagaggacggctcatatcaaggaaca
acatggcagatccggtttaaacttgattcagtcaatcaaggaggaacgtataaattgcgc
atcgcaattgcatctgcaactttagctgaagtgcaggttcgggtgaacaatccgagcaca
aatcgacctctatttacaactggattgattggaagagacaactcaattgctaggcatgga
attcatggcttatattggctgtacattatagacatacagggaaatcagctagtgcaaggg
gacaacaccatttacttaggccaaccaaggaaccaaagtcctttccaggggataatgtat
gactatattcgtctcgaagctccaccaaactaa
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