Capsicum annuum (peppers): 107855739
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Entry
107855739 CDS
T04646
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107855739
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107855739
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
107855739
NCBI-ProteinID:
XP_047267014
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Position
4:complement(216806705..216821708)
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AA seq
639 aa
AA seq
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MAPGVQLYLPDDHHVVMDNGTLQVTLSVPDGIVTGITYNGVDNLLEFLNDETNRGYWDVV
WSSAGTTGTTGSFERLRCTNYKVILETDDQIELSFSRKWDASLQGKLIPLNIDKRFIMLK
GSSGFYSYAIYEHLEGWPGFNLDETRIVFKLRKDKFHYMAMADNRQRYMPLPDDRLPDRG
QPLAYPEAVLLVNPIEPEFKGEVDDKYQYSCEDKDLKVHGWICMDPSIGFWIIIPSDEFR
SGGPLKQNLTSHVGPTALSMFHSAHYAGEDLVSKFGLGEPWKKVFGPVFIYLNSVTSEKD
PLTLWEDAKEQMQIQVQSWPYSFPCSEDFPSSSQHGNISGRLLVLDRYYLLDDKISASGA
YVGLAPPGEAGSWQRECKDYQFWTRADEEGKYVISNIRAGDYNLYAFVPGFIGDYKCDTI
ITITSGCSIEMDDLVFEPPRNGPTLWEIGIPDRSAREFYIPDPDPKYVNKLFINHPDRFR
QYGLWERYADLYPNGDIVFTIGESDYKKDWFFVQVTRKKDEKTYQGTTWQIKFKLENINQ
DEIYTLRLALASAAQAELQVRVNDSSTNTPLFSSGVIGKDNAIARHGIHGLYWLFNVNLQ
GSVLIEGENTIYLTQANATSPFQGIMYDYIRLEGPPFYN
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggctcccggagtacagctttaccttcccgacgatcaccatgtggtgatggacaatggt
actctccaagtgactctatcagtaccagatggcattgtaaccggaatcacatacaacggc
gtcgacaatttgctggagtttctaaacgatgaaacaaacagaggatactgggatgttgtg
tggagttcagcagggactacaggaactacaggatcatttgaaaggctcagatgcacaaac
tataaggtcatattggaaacagatgatcaaatagagctgtccttctcaaggaaatgggac
gcgtcgcttcagggcaaacttattcccctgaatatagacaaaaggtttataatgcttaaa
ggttcttcaggcttctattcttatgcaatttatgaacatttagagggatggcctggtttc
aaccttgatgagactaggattgtattcaagctcagaaaagacaagtttcattacatggct
atggcagataataggcagagatacatgccactacctgatgataggttaccagatagagga
caaccacttgcttatccagaagcagtcctgcttgtcaatcccatcgagcctgaattcaaa
ggcgaggttgatgacaagtatcagtactcatgcgaggacaaagatctcaaggtccatggt
tggatttgtatggatccatcaataggattctggattattattcccagtgacgaatttcga
tctggtggaccccttaaacaaaacctcacttcccatgttggtccaactgctctttctatg
ttccacagtgctcattatgcaggagaagatttggtttcaaagtttggactaggggagcca
tggaaaaaagtctttggaccagtttttatatatctgaactccgtcacttcagagaaggat
cccctaactctatgggaggatgcaaaagaacagatgcagatacaagttcaaagctggcct
tacagttttccctgctctgaggattttccctcatcgtctcaacacggtaatatcagtgga
agactgttagtcctagacaggtattatttgcttgatgataaaatatctgcttctggtgca
tatgttggcttggctccaccaggagaagccggttcgtggcaaagagaatgcaaggactac
caattctggacaagagcagatgaggaaggcaaatatgtaataagtaatatacgagcaggc
gactacaacttgtatgcatttgtccctggattcattggagattataaatgtgacaccata
atcacaattacctcaggctgcagcattgagatggatgatctcgtttttgaacccccgaga
aatggacctacactttgggaaattggcattcctgatcgttctgctcgcgaattttacatt
cctgatcctgatccaaaatatgttaacaaactctttattaatcatcctgatagatttaga
cagtacgggctatgggagagatacgccgatttgtatccaaatggggatatagtttttaca
attggagagagtgactacaagaaagattggttctttgttcaagtcactaggaaaaaggat
gagaagacgtatcaaggaacaacatggcaaataaagttcaaactcgaaaatattaatcaa
gacgaaatttatacactaagattggcacttgcatctgcagctcaagctgaactacaggta
cgcgttaatgattcaagcacgaatacacctttgttctcaagtggagtgataggaaaggac
aacgcgatagcgaggcatggaattcatggactctactggctgttcaatgtgaatttgcag
ggttctgtacttatcgaaggagaaaatactatatatttaacacaagcaaatgcaactagt
ccttttcaagggatcatgtatgattatattcgtctagaaggacctcctttctataactga
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