Capsicum annuum (peppers): 107855740
Help
Entry
107855740 CDS
T04646
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107855740
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107855740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
107855740
NCBI-ProteinID:
XP_047267015
LinkDB
All DBs
Position
4:complement(216824614..216829072)
Genome browser
AA seq
638 aa
AA seq
DB search
MAPGVQLYLPDDHHVVMDNGILQVTLSVPDGIVTRITYNSVDNLLEFLNDETNRGYWDVV
WSSAGTTGTTGIFERVICTNYKVILETDDQIELSFSRTWDVSLQDELIPLNIDKRFIMLK
GSSGFYSYAIYEHLEGWPGFNLDETRIAFKLRKDKFHYMAMADNRQRYMPLPDDRLPDRG
QPLAYPEAVLLVNPIEPEFKGEVDDKYQYSSEDKDLKVHGWICMDPSLGFWIIVPSDEFR
SGGPLKQNLTSHVGPTALSVFLSAHYAGEDLVPKFGQGEPWKKVFGPVFIYLNSVTSGED
PLTLWEDAKKQMLTEVQSWPYSFPCSEDFPSSSHRGNISGRMLVLDRYFKDDKIPASGAY
VGLAPPGEAGSWQRECKDYQFWTRADEEGKYVISNIRAGDYNLYAFVPGFIGDYKCDTII
TITSGCSIEMDDLVFEPPRNGPTLWEIGIPDRSAREFYIPDPDPKYVNKLFINHPDRFRQ
YGLWERYADLYPNGDIVFTIGESDYKKDWFFVQVTRKKDEKTYQGTTWQIKFKLENINQD
EIYTLRLALASAAQAELQVRVNDSSTNTPLFSSGVIGKDNAIARHGIHGLYWLFNVNLQG
SVLIEGENTIYLTQANATSPFQGIMYDYIRLEGPPSRY
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggctcccggagtacagctttaccttcccgacgaccaccatgtggtgatggacaatggt
attctccaagtgactttatcagtaccggatggcattgtaaccagaatcacatacaacagc
gtcgacaatttgcttgagtttctaaatgatgaaacaaacagaggatactgggatgttgtg
tggagttcagcagggactacaggaactacaggaatatttgaaagggtcatatgcacaaac
tataaggtcatattggaaacagatgatcaaatagagctgtccttctcaaggacatgggat
gtgtctctacaggacgaactcattcccctgaatatagacaagaggtttataatgcttaaa
ggttcctcaggcttctattcatatgcaatttatgaacatttagaaggatggcctggtttc
aaccttgacgagactaggattgcattcaagctcagaaaagacaagtttcattacatggct
atggcagataacaggcagagatacatgcccttacctgatgacaggttaccagatagagga
caaccacttgcttatccagaagcagtcctgctcgtcaatcccatcgagcctgaattcaaa
ggcgaggttgatgacaagtatcagtactcaagtgaggacaaagatctcaaggtccatgga
tggatttgtatggatccatcactaggattctggattattgttcccagtgacgaatttcga
tctggtggaccccttaaacaaaacctcacttctcatgttggtccaactgctctttctgtg
tttctcagtgctcattatgcaggagaagatttggttccaaagtttggacaaggggagccc
tggaaaaaagtatttggaccagtttttatatatctgaattctgtcacttcaggggaggat
ccccttactctatgggaggatgctaaaaaacagatgctgacagaagttcaaagctggcct
tacagttttccatgctctgaggattttccatcatcgtctcaccgtggtaatataagtgga
aggatgttagtccttgacagatacttcaaggatgataagataccggcttctggtgcatat
gtcggcttggctccaccaggagaagccggttcgtggcaaagagaatgcaaggactaccaa
ttctggacaagagcagatgaggaaggcaaatatgtaataagtaatatacgagcaggcgac
tacaacttgtatgcatttgtccctggattcattggagattataaatgtgacaccataatc
acaattacctcaggctgcagcattgagatggatgatctcgtttttgaacccccgagaaat
ggacctacactttgggaaattggcattcctgatcgttctgctcgcgaattttacattcct
gatcctgatccaaaatatgttaacaaactctttattaatcatcctgatagatttagacag
tacgggctatgggagagatacgccgatttgtatccaaatggggatatagtttttacaatt
ggagagagtgactacaagaaagattggttctttgttcaagtcactaggaaaaaggatgag
aagacgtatcaaggaacaacatggcaaataaagttcaaactcgaaaatattaatcaagac
gaaatttatacactaagattggcacttgcatctgcagctcaagctgaactacaggtacgc
gttaatgattcaagcacgaatacacctttgttctcaagtggagtgataggaaaggacaac
gcgatagcgaggcatggaattcatggactctactggctgttcaatgtgaatttgcagggt
tctgtacttatcgaaggagaaaatactatatatttaacacaagcaaatgcaactagtcct
tttcaagggatcatgtatgattatattcgtctagaaggacctccttctcgttactaa
DBGET
integrated database retrieval system
