Capsicum annuum (peppers): 107856013
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Entry
107856013 CDS
T04646
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cann03016
]
107856013
Enzymes [BR:
cann01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
107856013
Transfer RNA biogenesis [BR:
cann03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107856013
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
107856013
NCBI-ProteinID:
XP_016556499
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All DBs
Position
3:236663544..236673159
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AA seq
386 aa
AA seq
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MSVKRKREEDMEIVWQTPANPPQRHDYIHRNGIRYVKPYYFEFISHVKDRWAGKTIVDLF
TDEFKGRPRDYYESAVRSGRIQVDGQKVPVSYVVQPSQKISHFLHRHEPPVMSWDVEILC
EEPDVLTVCKPASVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARSA
SRADLFRQQIESGEVQKRYIARVLGVFPDKQQIVNANINYNAREGRSTVEVGDDQGNSTA
SLKGKAACTNFTRISTNGKHSIVLCEPVTGRTHQIRVHLQYTGHPIANDMLYLSEFVSIR
SAEGLSADRAAAKLCSPQPISLENGISDTGNDSNEDFSIDPMCTNCPNLGPKGYEGNEEG
LWLHCVKYSGPDWIYECPHPDWASLS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgaagagaaagcgagaggaggatatggagatagtgtggcaaactcccgccaac
ccaccccaacgccatgactacatccaccgtaacggaatacgatatgttaagccttactac
ttcgaattcatctctcatgtgaaggatcgatgggctgggaagacgatcgttgatctcttc
actgatgagtttaaagggagaccgcgcgattactatgaatctgctgttagatctggacgt
atacaagttgatggacaaaaggtccctgtttcatatgtagttcagccatcacaaaagatt
agccatttcctgcacaggcatgaaccaccagtgatgtcgtgggatgtcgaaatactatgt
gaagaaccagatgtgctgacagtttgcaagcctgcttctgttcctgtacatccatgtggc
caataccgcaagaatacggtcgttggtatactacaggccgagtatggcttggcaccttta
tttccggttcatcgcctagatcgcttggtctcaggactacttattttggcaaggagtgct
tctagggctgacctcttcaggcaacagatagaatcaggagaagtgcagaaacggtatatt
gcgagagtacttggagtattcccggataagcagcaaattgtgaatgctaatatcaattac
aatgctcgagaagggaggagcacagttgaggtgggggatgaccagggaaatagtactgct
tcactgaaggggaaggctgcctgtaccaattttacaaggattagtaccaatgggaagcac
agcattgttttgtgcgaacccgtgactggcaggacacatcagatacgtgtgcatctacag
tatacaggtcatcccatagccaatgatatgctctacctgtctgaatttgtgtctattcgc
tctgctgaaggattgagtgcagatagagctgcagcaaaattatgttcccctcagcccatc
tctcttgaaaatggaattagtgacacaggaaatgactccaatgaagatttcagcattgat
cctatgtgtacaaattgtccaaatcttggtccgaaagggtatgaggggaatgaagagggt
ctatggctgcattgtgtaaaatattcaggacctgactggatatatgaatgcccacatcca
gattgggcttctctaagttga
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