Capsicum annuum (peppers): 107857600
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Entry
107857600 CDS
T04646
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03440
Homologous recombination
cann03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107857600
03460 Fanconi anemia pathway
107857600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107857600
03036 Chromosome and associated proteins [BR:
cann03036
]
107857600
03400 DNA repair and recombination proteins [BR:
cann03400
]
107857600
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107857600
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
107857600
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
107857600
FA (Fanconi anemia) pathway
Downstream FA components
107857600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
Tower
Motif
Other DBs
NCBI-GeneID:
107857600
NCBI-ProteinID:
XP_047262273
LinkDB
All DBs
Position
2:complement(67281849..67285277)
Genome browser
AA seq
1085 aa
AA seq
DB search
MRTWQLYSSGNDFRWKVSDGESVIEQRSLAVAPQQQKLQSMPDLLRQGLAATNTDAKFPV
FPTGSAKPVPVKQSSISTPLTILAEHKALFDSGQGTGRENGFGFREAVFKKDSGKARLNR
AKALLGLEENGDHETFPGSEKKNRSSDELFGFRNSFPFAAAEGIASIGSTNVSAASLSSS
DVKFNSSVYPTKEITADKPPPIKFHTAGGRSISVSCEALKRARSLLGDLELVDEKDVADP
LFSFSKDQKSVDQASTKDLNYDTPVSLLSAAKGSGSSSLFTTPLRSTLCHKKSSIKSENL
IPASNLIKEFDAVAKESTNRLLDHSISLHGEPFNKNSATMDLRENVIASKPKLLERPSRG
PLVEISNNIGAGFADRNQNFSRKRKPGGSFVSPFKKPRSTNVVTPLKRNDAGAANGFSNL
APKLSPQKGKVSVRYPFHVARSYMKEYLGKPSSILSKLESVPDDVRRMNPATAETYVFSD
ESCSGCIGVESFLEMLSLSGASMQYISKKWVTNHYKWIVWKLASYERCYSDKFSGKLLKI
CNVLEELKYRYEREVNYGHRSAVKRILEGDVPPSSMMVLCVSNIDSICDSPVGRQSSSSS
TTQSGTCAKVELTDGWYSIIAVLDIPLSKKLAAGKLFVGQKLRIWGAGLCGWTDPVSPLE
ASGMTSLLLHINGTYRAHWASRLGLCKGGGIPLSFMSIKDSGGAVPITLVGISRIYPVLF
RERVSNGGFVVRSERMEAKEMQSFDERRSSIVEGVVSESQKEKKDAYIGSDYESKEGARI
LRILERAAEPELLMAEMTSEQLNLFSSYQAKLESLRQSDLQKSLEKALQAAGLAERDVTP
FMRVRVVGLTSRSTPMKCCPKEGLITIWNPTEKQQCELAEGQVFSVTGLTPISSDSSTLY
LQAKGSTAKWVPLSPEAIEHFEAFFCPRQSISLSKLGEVPMSREFDIAVVVVFVGQLYKE
AHQMKQWVFVTDGSTVMLNSNDESETLVAISFTAPCVGTDSFAPINSNLVGSTVCFCNLI
KRARDNINNLWVAEATENSTYYLSYDNSHCSHLKDAGASAERWAKISGLHIRCIFSNLYS
SFMQT
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgtggcagttgtactcctccgggaatgatttccgatggaaagtgtcggatgga
gagagcgtaattgaacaaaggagtttggccgtagctcctcagcagcagaagctccaatcg
atgcccgatctcttacgtcaaggactggcggcgaccaataccgatgccaaatttccagtt
tttccaactggatcagccaaacctgtgccagtcaagcagtcttccatatccacacctctt
accatccttgctgaacacaaggctcttttcgactcaggacaaggtactggaagagaaaat
ggttttggctttcgggaagctgtgttcaagaaagactcagggaaagctcgtcttaataga
gccaaggcattgttgggcttggaagaaaatggtgaccatgaaacatttccaggttcggaa
aagaagaatagatcttcagacgagctctttggttttcgaaattcatttccttttgcggca
gcagagggcattgctagcatagggtctactaatgtttcagcagcttcattgtcttcgtct
gacgttaaatttaactcctcagtttatccaacaaaggagattacagcagataaacctccc
ccaataaagtttcatactgccggtggtagatcaatatcagtttcctgtgaggcattgaaa
cgtgcaaggagtttgcttggagatctagagcttgtagatgaaaaggatgtcgctgatcca
ttgttttctttttcaaaggaccaaaaatctgttgatcaggcctccaccaaagatctgaac
tatgatactcctgtttccctcttatcagcagcgaaaggcagtgggtcctcaagccttttt
acaacgccattgagatcaactttgtgtcataagaagtcctcaattaaatcagagaatctc
attccggctagtaacttgataaaggaatttgatgctgtggcaaaagaaagcacgaatagg
ctgctggaccatagtatttcactgcatggagagccattcaataagaactcagcaactatg
gaccttagagaaaatgttattgcatcaaaacctaaattgctagaaaggccttccaggggt
cctttagtggaaatctcaaataacattggagcaggttttgcagatagaaaccagaacttt
agtcgtaagaggaaacctgggggaagttttgtttctccattcaagaagcctcgaagcacc
aacgtcgtcacccctctcaaaagaaatgatgccggtgctgctaatgggttctcaaattta
gcaccaaaattatcccctcaaaaaggaaaggtttcagttcgatatccattccatgtggca
cgatcatatatgaaggagtatcttggaaagccctcatcaatcctgagcaagctagagagt
gtgccagatgacgtaagaaggatgaatccagctactgctgagacttatgtgttcagtgat
gaatcttgctcaggttgcattggagtagaatcttttttggagatgctgtctctatcagga
gcttctatgcaatatatttctaaaaagtgggttacaaatcactataagtggattgtttgg
aaacttgcatcttacgagaggtgttacagtgacaaattttctgggaaacttctgaaaatc
tgcaatgtacttgaagaattaaaatatagatatgaaagagaagtaaattatggtcatcga
tctgcagttaagagaattctagaaggagatgtcccaccttcttctatgatggtactctgt
gtttccaatatcgattcaatttgcgactccccagtcggacgtcaatcttcatcatctagc
acgacccaaagtggaacttgtgcaaaagttgaactgacggatggttggtattcaataatt
gctgtcttagatataccactatccaagaagttggctgctggaaagctgtttgttggccaa
aagcttaggatttggggagctggactgtgtggctggacagatcctgtttcacctcttgag
gcatcagggatgactagtttgctgctgcatataaatgggacatatagagctcattgggca
tctcgtttgggcttatgtaaaggcggtggtattccattatcatttatgtcaatcaaggat
agcggaggtgctgttccaataacattggttggaatttcaaggatatatcctgttctcttc
agggaaagggtaagtaatggggggtttgttgtacgatctgaacggatggaagctaaagag
atgcagtcttttgatgaaagacgcagtagcattgtggagggagtagtctcagaatctcaa
aaagaaaagaaagatgcctacataggaagcgactacgaaagtaaagaaggggcaaggatt
ttgaggatactcgagagagctgcagaaccagaacttctgatggcagagatgacttcagag
cagttgaatttattttcatcctatcaagcaaagttggagtcattgcggcagtcggacctg
cagaaatctcttgaaaaagctctgcaagctgctggacttgctgaaagagacgtcactccg
tttatgcgagttagagttgttggattgactagccgaagtacaccaatgaagtgctgtcca
aaggaaggcttaattacaatatggaatcctactgagaaacagcaatgtgagcttgcagag
ggtcaagttttttctgttacagggcttacaccgataagctcggactctagcaccctttac
ttgcaagcgaaagggtccacagccaaatgggtgcctttgtctcctgaggcaatcgagcat
tttgaggcctttttctgtcctcgccaatcaatttcattgagtaaattgggtgaagttcct
atgtccagggaatttgatattgctgtggtggttgtttttgtggggcagctgtataaagaa
gctcatcaaatgaaacagtgggtatttgtaactgatggatccacagttatgttgaattcc
aacgatgaatcagaaaccttggtggccatcagtttcaccgcaccatgcgtaggaactgat
tcatttgcaccaataaactctaaccttgtaggatctacggtttgtttctgtaatctcatc
aagagagcaagagataatattaataacctctgggtagctgaagcaactgaaaattcaacc
tattatttaagttatgataattcacattgttctcatctaaaagatgctggtgcttctgct
gaaagatgggcaaaaatatctggcttgcatattaggtgcattttttcaaatttgtattct
tcctttatgcagacttga
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