Capsicum annuum (peppers): 107858033
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Entry
107858033 CDS
T04646
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03020
RNA polymerase
cann03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107858033
09124 Replication and repair
03420 Nucleotide excision repair
107858033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107858033
03400 DNA repair and recombination proteins [BR:
cann03400
]
107858033
Enzymes [BR:
cann01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107858033
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107858033
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107858033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
107858033
NCBI-ProteinID:
XP_047262904
LinkDB
All DBs
Position
2:129432030..129440874
Genome browser
AA seq
1207 aa
AA seq
DB search
MDMEEEYEPQYNVVDVDGDDDVDGDGYGEGDEEEEITQEDAWAVISAYFEEKGLVRQQLD
SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDG
ETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSS
YCTLFQNSEKDLTELGECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFV
AEVRSMAESQNRPPSAMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVA
DKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAK
EILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLL
GGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAG
TRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACG
LVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPD
MLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQT
LQQRESPDEGGWHDLVAKGYIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCE
IHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKP
LVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDE
EKKMGTLVKEDFGRPDRATTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDD
AQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRH
GQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDA
TPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIH
SRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE
RCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAK
DQKKKGA
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaggaagagtatgaaccgcaatataatgttgttgatgttgatggggatgat
gatgttgatggtgatggttatggtgagggggatgaagaagaggagataacacaggaagat
gcatgggcggttattagtgcttactttgaagagaagggacttgttcgtcaacaacttgat
tcttttgatgagtttattcagaatactatgcaggaaattgttgatgaatctgctgatatt
gagatccgtcccgaatctcagcataaccctggtcaccaatctgacttcgctgagactatc
tacaaaatcaattttggtcagatttatttgagtaagccaatgatgacagagtcagatggt
gaaactgctaccttatttccaaaggctgcaaggttgaggaatctcacatattccgcacct
ttatacgtggatgtatcaaaacgagtcatcaagaaagggcatgatggtgaagaagttact
gaaactcaggacttcacaaaagtctttattggaaaggttcctataatgctgcggtcaagt
tactgcacattatttcaaaattctgagaaggatctaactgagcttggagaatgtccatta
gatcaaggcgggtatttcattataaatggaagtgaaaaggtcctaatcgctcaggagaag
atgagcacgaaccatgtgtacgtctttaagaagaggcaacctaataagtatgcctttgtt
gcggaagtgaggtcaatggcagaatctcaaaaccgcccgccaagtgctatgtttgtgcgg
atgctctcaaggactagtgcgaaagggggttcctcgggccaatacattcgggcaacactt
ccatatatccgtacagagattcctatcattatcgtgtttcgtgctctaggttttgttgct
gataaggatatattggaacatatttgttacgatttcaatgatactcaaatgatggagttg
ttacgtccgtcgttggaagaagcttttgtcatacaaaatcaacaggttgctcttgattac
attggaaagagaggggctacagttggtgttacaaaggaaaagaggataaagtatgccaaa
gaaattcttcagaaagaaatgcttcctcatgttgggattggagagtattgtgaaacaaag
aaagcttattattttgggtatattatccaccggcttctgttatgtgcccttggccgaagg
gccgaggatgatagggatcattatggaaataagagactggatcttgctggtcctttgctc
ggtgggctgtttcggatgctctttagaaagttgacaagggatgttagaggctatgtgcag
aagtgtgttgacaatggaaaagatgtaaatcttcaatttgcaatcaaagctaaaaccatt
accagtgggctgaaatactctcttgctactggaaactggggtcaagctaatgcagcgggt
acaagagctggtgtttcacaggtgctgaatcgtctgacttatgcatctactttgtctcac
ttgcgaaggttgaattcccctattgggcgagaagggaaactggccaaaccaaggcaattg
cataattcacaatggggaatgatgtgtcctgcagaaacaccagagggtcaagcatgcggg
ctggtgaagaatctggctttaatggtttatataacagttggttcagcagcatatccaatt
ttggagtttctggaagagtggggtactgagaactttgaggaaatttctcctgccgttatt
ccacaggctacaaagatctttgtcaatggtacttgggtgggaattcatcgtgatcctgac
atgttggtgagaacattgagacgacttaggagaagggttgacgtcaatactgaagttggg
gttgttcgtgatatccgtttgaaagaacttcgaatttatactgactatggcaggtgcagt
cgtccattgtttattgtggaaaagcaaaggctgatgatcaagaagaaggatattcaaaca
ttgcagcaacgggaatcacctgacgagggcggctggcacgatctagtggctaagggatac
atcgagtacatcgacactgaagaggaagaaacaacgatgattagcatgactataaatgat
cttgtgcaagcacgccttaatccaggggacgcttattctgatacctatactcactgtgaa
attcacccatcactaatattgggtgtttgtgcatcaattattccatttccggatcataat
cagtctccccgtaatacttatcagtcagctatgggtaagcaagccatgggaatttatgtc
accaactaccaatttcggatggacacattggcctatgtgctttattatccgcagaagcct
cttgtcacgacacgagccatggaacacttgcattttaggcaactacctgcgggcatcaat
gcaattgttgccatttcctgctattctggatacaatcaagaggattctgtcattatgaat
cagtcatcgattgatcgtggatttttccgatctctatttttccgttcatacagggatgag
gaaaaaaagatggggacgttggtcaaggaggactttggacgtcctgatagagctactacc
atgggaatgcggcatggttcatatgataagttggatgatgatggccttgcacctccggga
acaagagtttctggtgaggatgttatcattgggaagacaactcccatttctcaagatgat
gcacaagggcaagcctctcgttatacgaggaaagatcacagtaccagtctccgccatagt
gaaactggaatggtggatcaggttttattaacaacgaatgctgatgggctcagatttgtt
aaagtgagggtcagatctgtccgtatccctcaaattggggacaagtttagcagtagacat
ggtcagaagggaacagtaggcatgacatatacccaagaggatatgccatggaccgtagaa
ggcatcactcctgatattattgtgaatcctcatgctattccttctcgaatgactattggc
caactgattgaatgtattatggggaaggttgctgcacacatgggaaaggagggtgatgcc
actccctttacagatgttactgtggataacatcagcaaagctctgcataaatgtggttac
cagatgcgtggttttgagaccatgtacaatggtcatactgggcggcggcttactgcaatg
atattccttggtcccacatactaccagcggttgaagcatatggttgatgacaagattcat
tctagaggcagaggccctgtgcaaatcctcacaaggcagcctgcggaaggtcggtcccgt
gatggtggtcttcgttttggagagatggagcgagattgtatgattgctcacggtgctgct
cattttctgaaagagcgtttattcgatcaaagcgacgcctacagggttcatgtttgtgaa
cgctgtgggctgatcgccattgctaacctcaagaagaattcttttgaatgcagaggttgc
aaaaacaagactgacatcgtccaggttcatattccctatgcatgcaaattgcttttccag
gagctaatggctatggctatagctccaagaatgcttaccaaggatgtcaagcaagccaaa
gatcaaaagaagaaaggagcttga
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integrated database retrieval system
